ENSDARG00000041839


Danio rerio

Features
Gene ID: ENSDARG00000041839
  
Biological name :tsc22d2
  
Synonyms : tsc22d2 / TSC22 domain family 2
  
Possible biological names infered from orthology : O75157 / TSC22 domain family member 2
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 35205017
Gene end: 35263902
  
Corresponding Affymetrix probe sets: Dr.13259.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000125584
Ensembl peptide - ENSDARP00000061314
Ensembl peptide - ENSDARP00000120772
Ensembl peptide - ENSDARP00000154491
NCBI entrez gene - 378875     See in Manteia.
RefSeq - NM_200109
RefSeq Peptide - NP_956403
swissprot - H0WFF2
swissprot - Q6TEL2
ZFIN ID - ZDB-GENE-031001-12
Ensembl - ENSDARG00000041839
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TSC22D2ENSGALG00000027591Gallus gallus
 O75157ENSG00000196428Homo sapiens
 Tsc22d2ENSMUSG00000027806Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tsc22d1 / TSC22 domain family, member 1 / P62500* / Q15714*ENSDARG0000003830631
si:ch211-220e11.3 / TSC22D3 (1 of many) / Q99576* / Q9Z2S7* / TSC22D3* / TSC22 domain family member 3* / TSC22 domain family protein 3 *ENSDARG0000010549814
zgc:65895ENSDARG0000003408611
tsc22d3 / TSC22 domain family, member 3 / Q99576* / Q9Z2S7* / TSC22 domain family protein 3 *ENSDARG0000007566611


Protein motifs (from Interpro)
Interpro ID Name
 IPR000580  TSC-22 / Dip / Bun


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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