ENSG00000196428


Homo sapiens

Features
Gene ID: ENSG00000196428
  
Biological name :TSC22D2
  
Synonyms : O75157 / TSC22D2 / TSC22 domain family member 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: q25.1
Gene start: 150408335
Gene end: 150466431
  
Corresponding Affymetrix probe sets: 204094_s_at (Human Genome U133 Plus 2.0 Array)   210953_at (Human Genome U133 Plus 2.0 Array)   210954_s_at (Human Genome U133 Plus 2.0 Array)   215547_at (Human Genome U133 Plus 2.0 Array)   238932_at (Human Genome U133 Plus 2.0 Array)   240557_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000417747
Ensembl peptide - ENSP00000354543
Ensembl peptide - ENSP00000418149
Ensembl peptide - ENSP00000420689
NCBI entrez gene - 9819     See in Manteia.
OMIM - 617724
RefSeq - NM_001303264
RefSeq - NM_014779
RefSeq Peptide - NP_001290193
RefSeq Peptide - NP_055594
swissprot - O75157
swissprot - H0Y865
swissprot - H0Y8E9
swissprot - H7C4U3
Ensembl - ENSG00000196428
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tsc22d2ENSDARG00000041839Danio rerio
 TSC22D2ENSGALG00000027591Gallus gallus
 Tsc22d2ENSMUSG00000027806Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q15714 / TSC22D1 / TSC22 domain family member 1ENSG0000010280436
Q9Y3Q8 / TSC22D4 / TSC22 domain family member 4ENSG0000016692519
Q99576 / TSC22D3 / TSC22 domain family member 3ENSG0000015751411


Protein motifs (from Interpro)
Interpro ID Name
 IPR000580  TSC-22 / Dip / Bun


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006970 response to osmotic stress IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr