ENSG00000102804


Homo sapiens

Features
Gene ID: ENSG00000102804
  
Biological name :TSC22D1
  
Synonyms : Q15714 / TSC22D1 / TSC22 domain family member 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 13
Strand: -1
Band: q14.11
Gene start: 44432143
Gene end: 44577147
  
Corresponding Affymetrix probe sets: 215111_s_at (Human Genome U133 Plus 2.0 Array)   235315_at (Human Genome U133 Plus 2.0 Array)   239123_at (Human Genome U133 Plus 2.0 Array)   243133_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000417476
Ensembl peptide - ENSP00000418739
Ensembl peptide - ENSP00000483407
Ensembl peptide - ENSP00000481585
Ensembl peptide - ENSP00000437414
Ensembl peptide - ENSP00000419864
Ensembl peptide - ENSP00000261489
Ensembl peptide - ENSP00000397435
NCBI entrez gene - 8848     See in Manteia.
OMIM - 607715
RefSeq - NM_183422
RefSeq - NM_001243797
RefSeq - NM_001243798
RefSeq - NM_001243799
RefSeq - NM_006022
RefSeq Peptide - NP_001230726
RefSeq Peptide - NP_001230727
RefSeq Peptide - NP_001230728
RefSeq Peptide - NP_006013
RefSeq Peptide - NP_904358
swissprot - Q15714
swissprot - C9IZ15
swissprot - A0A087X0H8
swissprot - A0A024RDV8
swissprot - H7C4J9
swissprot - C9JYW3
Ensembl - ENSG00000102804
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tsc22d1ENSDARG00000038306Danio rerio
 TSC22D1ENSGALG00000016971Gallus gallus
 P62500ENSMUSG00000022010Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O75157 / TSC22D2 / TSC22 domain family member 2ENSG0000019642826
Q9Y3Q8 / TSC22D4 / TSC22 domain family member 4ENSG0000016692514
Q99576 / TSC22D3 / TSC22 domain family member 3ENSG000001575148


Protein motifs (from Interpro)
Interpro ID Name
 IPR000580  TSC-22 / Dip / Bun
 IPR036638  Helix-loop-helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006366 transcription by RNA polymerase II TAS
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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