ENSMUSG00000022010


Mus musculus

Features
Gene ID: ENSMUSG00000022010
  
Biological name :Tsc22d1
  
Synonyms : P62500 / Tsc22d1 / TSC22 domain family, member 1
  
Possible biological names infered from orthology : Q15714
  
Species: Mus musculus
  
Chr. number: 14
Strand: 1
Band: D3
Gene start: 76414961
Gene end: 76507765
  
Corresponding Affymetrix probe sets: 10416522 (MoGene1.0st)   1425742_a_at (Mouse Genome 430 2.0 Array)   1433899_x_at (Mouse Genome 430 2.0 Array)   1435952_at (Mouse Genome 430 2.0 Array)   1439111_at (Mouse Genome 430 2.0 Array)   1454758_a_at (Mouse Genome 430 2.0 Array)   1454971_x_at (Mouse Genome 430 2.0 Array)   1456132_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000135561
Ensembl peptide - ENSMUSP00000135493
Ensembl peptide - ENSMUSP00000135789
Ensembl peptide - ENSMUSP00000135806
Ensembl peptide - ENSMUSP00000022587
Ensembl peptide - ENSMUSP00000044517
Ensembl peptide - ENSMUSP00000099140
Ensembl peptide - ENSMUSP00000106513
Ensembl peptide - ENSMUSP00000134792
Ensembl peptide - ENSMUSP00000135146
Ensembl peptide - ENSMUSP00000135202
Ensembl peptide - ENSMUSP00000135296
Ensembl peptide - ENSMUSP00000135307
NCBI entrez gene - 21807     See in Manteia.
MGI - MGI:109127
RefSeq - XM_017315944
RefSeq - NM_001177751
RefSeq - NM_001310646
RefSeq - NM_001310647
RefSeq - NM_009366
RefSeq - NM_207652
RefSeq - XM_006518803
RefSeq - XM_017315942
RefSeq - XM_017315943
RefSeq Peptide - NP_001297576
RefSeq Peptide - NP_997535
RefSeq Peptide - NP_001171222
RefSeq Peptide - NP_001297575
RefSeq Peptide - NP_033392
swissprot - H3BJ00
swissprot - H3BJV9
swissprot - H3BK07
swissprot - H3BK98
swissprot - H3BLH4
swissprot - H3BLI9
swissprot - D3Z0V7
swissprot - P62500
swissprot - Q3UXU0
swissprot - D3YW86
swissprot - E9QLZ1
Ensembl - ENSMUSG00000022010
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tsc22d1ENSDARG00000038306Danio rerio
 TSC22D1ENSGALG00000016971Gallus gallus
 Q15714ENSG00000102804Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tsc22d2 / TSC22 domain family, member 2 / O75157*ENSMUSG0000002780624
Q9EQN3 / Tsc22d4 / TSC22 domain family, member 4 / Q9Y3Q8*ENSMUSG0000002972311
Q9Z2S7 / Tsc22d3 / TSC22 domain family protein 3 / Q99576* / TSC22 domain family member 3*ENSMUSG000000314318


Protein motifs (from Interpro)
Interpro ID Name
 IPR000580  TSC-22 / Dip / Bun


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0008284 positive regulation of cell proliferation IDA
 biological_processGO:0043065 positive regulation of apoptotic process IDA
 biological_processGO:0043066 negative regulation of apoptotic process IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002834 decreased heart weight "less than average weight of the heart compared to the average for a particular strain" [RGD:Rat Genome Database submission]
Show

Allelic Composition: Grin1tm2Stl/Grin1tm2Stl,Tg(Actb-tTA)1Jzt/0,Tg(Camk2a-cre)62Jzt/0,Tg(tetO-Grin1/GFP)1Jzt/0
Genetic Background: involves: 129S4/SvJae * C57BL/6 * CBA

 MP:0003918 decreased kidney weight "reduced heft of the organs responsible for urine secretion" [RGD:Rat Genome Database submission]
Show

Allelic Composition: Grin1tm2Stl/Grin1tm2Stl,Tg(Actb-tTA)1Jzt/0,Tg(Camk2a-cre)62Jzt/0,Tg(tetO-Grin1/GFP)1Jzt/0
Genetic Background: involves: 129S4/SvJae * C57BL/6 * CBA

 MP:0009278 abnormal bone marrow cell physiology "any functional anomaly of any of the cells found in the blood" [MGI:tmeehan "Terry Meehan, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Grin1tm2Stl/Grin1tm2Stl,Tg(Actb-tTA)1Jzt/0,Tg(Camk2a-cre)62Jzt/0,Tg(tetO-Grin1/GFP)1Jzt/0
Genetic Background: involves: 129S4/SvJae * C57BL/6 * CBA

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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