ENSMUSG00000031431


Mus musculus

Features
Gene ID: ENSMUSG00000031431
  
Biological name :Tsc22d3
  
Synonyms : Q9Z2S7 / Tsc22d3 / TSC22 domain family protein 3
  
Possible biological names infered from orthology : Q99576 / TSC22 domain family member 3
  
Species: Mus musculus
  
Chr. number: X
Strand: -1
Band: F1
Gene start: 140539528
Gene end: 140600659
  
Corresponding Affymetrix probe sets: 10606989 (MoGene1.0st)   1420772_a_at (Mouse Genome 430 2.0 Array)   1425281_a_at (Mouse Genome 430 2.0 Array)   1425557_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000062589
Ensembl peptide - ENSMUSP00000108620
Ensembl peptide - ENSMUSP00000123569
NCBI entrez gene - 14605     See in Manteia.
MGI - MGI:1196284
RefSeq - XM_006528505
RefSeq - NM_001077364
RefSeq - NM_010286
RefSeq - XM_006528499
RefSeq - XM_006528500
RefSeq - XM_006528501
RefSeq - XM_006528504
RefSeq Peptide - NP_001070832
RefSeq Peptide - NP_034416
swissprot - Q9Z2S7
swissprot - B1AVF2
Ensembl - ENSMUSG00000031431
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-220e11.3ENSDARG00000105498Danio rerio
 tsc22d3ENSDARG00000075666Danio rerio
 TSC22D3ENSGALG00000027069Gallus gallus
 Q99576ENSG00000157514Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P62500 / Tsc22d1 / TSC22 domain family, member 1 / Q15714*ENSMUSG0000002201041
Tsc22d2 / TSC22 domain family, member 2 / O75157*ENSMUSG0000002780640
Q9EQN3 / Tsc22d4 / TSC22 domain family, member 4 / Q9Y3Q8*ENSMUSG0000002972319


Protein motifs (from Interpro)
Interpro ID Name
 IPR000580  TSC-22 / Dip / Bun


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006970 response to osmotic stress IDA
 biological_processGO:0048642 negative regulation of skeletal muscle tissue development IDA
 biological_processGO:0070236 negative regulation of activation-induced cell death of T cells IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043426 MRF binding IPI


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001147 small testis "reduced size of the male reproductive glands" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:58959]
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Allelic Composition: Pou3f4sdl/Y
Genetic Background: C3HeB/FeJ-Pou3f4sdl

 MP:0001152 Leydig cell hyperplasia "increased number of interstitial cells of the seminiferous tubules that secrete testosterone" [J:45065]
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Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

 MP:0001155 arrest of spermatogenesis "block of the process by which spermatogonial stem cells divide and differentiate into spermatozoa" [J:62271]
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Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

 MP:0001156 abnormal spermatogenesis "incomplete maturation or aberrant formation of the male gametes" [J:58959]
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Allelic Composition: GarsC201R/GarsNmf249,Tg(CAG-GARS)DRwb/0
Genetic Background: involves: BALB/cAnN * C3H/HeH * C57BL/6J * FVB/N

Allelic Composition: Tsc22d3tm1Ric/Y,Tg(Ddx4-cre)1Dcas/?
Genetic Background: involves: C57BL/6 * FVB

Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

 MP:0001262 decreased body weight "lower than normal average weight " [J:61295]
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Allelic Composition: Drd1tm1.1Mmsh/Drd1tm1.1Mmsh,Gng7tm1(cre)Mmsh/?
Genetic Background: involves: C57BL/6N

 MP:0001750 increased circulating follicle stimulating hormone level "higher than normal levels in the blood stream of FSH, the hormone that, in females, stimulates the graafian follicles of the ovary and assists in follicular maturation and the secretion of estradiol; in the male it stimulates the epithelium of the seminiferous tubules and is partly responsible for spermatogenesis " [J:35782, Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

 MP:0001765 abnormal ion homeostasis "anomaly in the state of equilibrium in the body with respect to charged molecules in the fluids and tissues" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Drd1tm1.1Mmsh/Drd1tm1.1Mmsh,Gng7tm1(cre)Mmsh/?
Genetic Background: involves: C57BL/6N

 MP:0001776 abnormal circulating sodium level "anomalous concentration in the blood of this metallic element, the most plentiful extracellular ion in the body and the principal determinant of extracellular fluid volume" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Drd1tm1.1Mmsh/Drd1tm1.1Mmsh,Gng7tm1(cre)Mmsh/?
Genetic Background: involves: C57BL/6N

 MP:0001925 male infertility "inability of male to produce live offspring" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:60409]
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Allelic Composition: GarsC201R/GarsNmf249,Tg(CAG-GARS)DRwb/0
Genetic Background: involves: BALB/cAnN * C3H/HeH * C57BL/6J * FVB/N

Allelic Composition: Tsc22d3tm1Ric/Y,Tg(Ddx4-cre)1Dcas/?
Genetic Background: involves: C57BL/6 * FVB

Allelic Composition: Tsc22d3tm1.2Efmd/Y
Genetic Background: Not Specified

Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

Allelic Composition: Tsc22d3tm1.1Hum/Y,Tg(Ddx4-cre)1Dcas/0
Genetic Background: involves: 129S1/SvImJ * C57BL/6N * FVB

 MP:0002078 abnormal glucose homeostasis "anomaly in the state of equilibrium or processing in the body with respect to glucose in the fluids and tissues" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Drd1tm1.1Mmsh/Drd1tm1.1Mmsh,Gng7tm1(cre)Mmsh/?
Genetic Background: involves: C57BL/6N

 MP:0002079 increased circulating insulin level "greater than normal levels of insulin in blood" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

 MP:0002310 resistance to fatty liver development "less likely than the norm to to develop hepatic steatosis " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

 MP:0002425 altered susceptibility to autoimmune disorder "a change in the likelihood that an organism will develop disease characterized by production of antibodies that react with host tissues or immune effector cells that are autoreactive to endogenous peptides" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Tsc22d3tm1.2Efmd/Y
Genetic Background: Not Specified

 MP:0002665 decreased circulating corticosterone level "less than the normal blood concentration of this adrenocortical steroid; induces glycogen deposition and regulates sodium conservation and potassium secretion" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

 MP:0002685 abnormal proliferation of spermatogonia "reduction in the proliferation of the spermatogonial stem cells either due to reduced mitosis or increased apoptosis" [pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator, J:62271]
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Allelic Composition: GarsC201R/GarsNmf249,Tg(CAG-GARS)DRwb/0
Genetic Background: involves: BALB/cAnN * C3H/HeH * C57BL/6J * FVB/N

 MP:0002776 Sertoli cell hyperplasia "increased number of cells of the seminiferous tubules that create the blood-testes barrier and enable spermatogenesis" [J:71710, pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator]
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Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

 MP:0002781 increased circulating testosterone level "greater than the normal blood concentration of this most potent androgen" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

 MP:0003944 abnormal T cell subpopulation ratio "deviation from the standard ratios of T cell subpopulations (e.g. double positive to single positive ratio) compared to control samples" [mberry:Melissa Berry, Genetics Resources Curator]
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Allelic Composition: Tsc22d3tm1.2Efmd/Y
Genetic Background: Not Specified

 MP:0004849 abnormal testis size "anomaly in the size of the male reproductive glands" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: GarsC201R/GarsNmf249,Tg(CAG-GARS)DRwb/0
Genetic Background: involves: BALB/cAnN * C3H/HeH * C57BL/6J * FVB/N

Allelic Composition: Tsc22d3tm1Ric/Y,Tg(Ddx4-cre)1Dcas/?
Genetic Background: involves: C57BL/6 * FVB

 MP:0004852 decreased testis weight "reduced average weight of the male reproductive glands" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

 MP:0004901 decreased male germ cell number "reduced numbers of male germ cells whether they are undifferentiated or fully differentiated" [MGI:llw2 "Linda Washburn, Mouse Genome Informatics Curator", MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: GarsC201R/GarsNmf249,Tg(CAG-GARS)DRwb/0
Genetic Background: involves: BALB/cAnN * C3H/HeH * C57BL/6J * FVB/N

Allelic Composition: Tsc22d3tm1Ric/Y,Tg(Ddx4-cre)1Dcas/?
Genetic Background: involves: C57BL/6 * FVB

 MP:0004956 decreased thymus weight "reduction in the average weight of the primary lymphoid organ that is required for maturation of T cells" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

 MP:0005159 azoospermia "absence of living spermatozoa " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: GarsC201R/GarsNmf249,Tg(CAG-GARS)DRwb/0
Genetic Background: involves: BALB/cAnN * C3H/HeH * C57BL/6J * FVB/N

Allelic Composition: Tsc22d3tm1Ric/Y,Tg(Ddx4-cre)1Dcas/?
Genetic Background: involves: C57BL/6 * FVB

Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

Allelic Composition: Tsc22d3tm1.1Hum/Y,Tg(Ddx4-cre)1Dcas/0
Genetic Background: involves: 129S1/SvImJ * C57BL/6N * FVB

 MP:0005418 abnormal circulating hormone level "anomalous blood concentration of any of the chemical substances that have specific regulatory effects on the activity of a certain organ or organs; originally applied to substances secreted by various endocrine glands and transported in the bloodstream to the target organs, it is sometimes extended to include substances that are not produced by the endocrine glands but that have similar effects" [MeSH:National Library of Medicine - Medical Subject Headings , 2003, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

 MP:0005459 decreased percent body fat "less fat, relative to the norm, as a percentage of total body weight" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

 MP:0005617 increased susceptibility to type IV hypersensitivity reaction "greater likelihood of developing an antigen-elicited cellular immune reaction that results in tissue damage, but does not require Ab participation; the response is seen at the area of contact " [Pathology:ISBN 0-397-51047-0, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Tsc22d3tm1.2Efmd/Y
Genetic Background: Not Specified

 MP:0005627 increased circulating potassium level "greater than the normal concentration in the blood of this alkaline metallic element, the most abundant intracellular ion; anomalies in the extracellular (circulating) concentration have important implications for the function of excitable tissues, such as nerve and muscle" [RGD:Rat Genome Database submission]
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Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

 MP:0005666 abnormal adipose tissue physiology "functional anomaly of the connective tissue composed of fat cells enmeshed in areolar tissue" [cwg:Carroll-Ann W. Goldsmith, Mouse Genome Informatics curator, MeSH:National Library of Medicine - Medical Subject Headings, 2003]
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Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

 MP:0006380 abnormal spermatid morphology "anomaly in the number or structure of the male germ cells that without further cell division give rise to mature spermatozoa" [ISBN:0-8036-0655-99 "Taber s Cyclopedic Medical Dictionary, 19th edition", MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: GarsC201R/GarsNmf249,Tg(CAG-GARS)DRwb/0
Genetic Background: involves: BALB/cAnN * C3H/HeH * C57BL/6J * FVB/N

Allelic Composition: Tsc22d3tm1Ric/Y,Tg(Ddx4-cre)1Dcas/?
Genetic Background: involves: C57BL/6 * FVB

 MP:0008261 arrest of male meiosis "cessation of the progression of the process of nuclear division that results in sperm with one half the normal chromosome number of the original cell" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
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Allelic Composition: GarsC201R/GarsNmf249,Tg(CAG-GARS)DRwb/0
Genetic Background: involves: BALB/cAnN * C3H/HeH * C57BL/6J * FVB/N

Allelic Composition: Tsc22d3tm1Ric/Y,Tg(Ddx4-cre)1Dcas/?
Genetic Background: involves: C57BL/6 * FVB

Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

 MP:0008280 male germ cell apoptosis "presence of male germs cells that undergo programmed cell death" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

 MP:0008566 increased interferon-gamma secretion "increase in the production or release of the major interferon produced by mitogenically or antigenically stimulated lymphocytes that is involved in immunoregulation" [MESH:D12.644.276.374.440.893]
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Allelic Composition: Tsc22d3tm1.2Efmd/Y
Genetic Background: Not Specified

 MP:0008681 increased interleukin-17 secretion "increase in the production or release of a proinflammatory cytokine produced primarily by T-cells or their precursors" [MESH:D12.644.276.374.465.517]
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Allelic Composition: Tsc22d3tm1.2Efmd/Y
Genetic Background: Not Specified

 MP:0008827 abnormal thymus cell ratio "deviation from the standard ratios of thymocyte subpopulations compared to control samples" [MGI:mberry "Melissa Berry, Genetics Resources Curator"]
Show

Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

 MP:0009176 increased pancreatic alpha cell number "increase in the number of the cells of the pancreas that secrete glucagon" [MESH:A03.734.414.065]
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Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

 MP:0010134 decreased DN3 thymocyte number "reduced number of thymocytes that have the cell surface marker phenotype CD4-negative, CD8-negative, CD44-positive, and CD25-negative and expressing the T cell receptor beta-chain in complex with the pre-T cell receptor alpha chain." [CL:0000807]
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Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

 MP:0010135 increased DN4 thymocyte number "increased number of thymocytes that have the cell surface marker phenotype CD4-negative, CD8-negative, CD44-negative, CD25-negative, and pre-TCR-positive." [CL:0000808]
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Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

 MP:0011178 increased erythroblast number "greater number of the nucleated precursor of erythrocytes" [MGI:csmith]
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Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

 MP:0011750 abnormal seminiferous tubule epithelium morphology "any structural anomaly of the stratified epithelial lining of the seminiferous tubules, consisting of the developing spermatozoa and the supporting Sertoli cells, which are tall, columnar type cells that line the tubule" [MGI:csmith]
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Allelic Composition: Tsc22d3tm1.2Hum/Y
Genetic Background: involves: 129S1/SvImJ

Allelic Composition: Tsc22d3tm1.1Hum/Y,Tg(Ddx4-cre)1Dcas/0
Genetic Background: involves: 129S1/SvImJ * C57BL/6N * FVB

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000000441 Raf1 / Q99N57 / Mus musculus v-raf-leukemia viral onco 1 (Raf1), transcript variant 3, mRNA. / P04049* / Raf-1 proto-oncogene, serine/threonine kinase*  / complex
 ENSMUSG00000017868 Sgk2 / Q9QZS5 / Serine/threonine-protein kinase Sgk2 / Q9HBY8* / SGK2, serine/threonine kinase 2*  / complex
 ENSMUSG00000019970 Sgk1 / Q9WVC6 / Serine/threonine-protein kinase Sgk1 / O00141* / serum/glucocorticoid regulated kinase 1*  / complex
 ENSMUSG00000041058 Wwp1 / Q8BZZ3 / WW domain containing E3 ubiquitin protein ligase 1 / Q9H0M0*  / complex
 ENSMUSG00000025915 Sgk3 / Q9ERE3 / serum/glucocorticoid regulated kinase 3 / Q96BR1* / serum/glucocorticoid regulated kinase family member 3*  / complex






 

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