ENSDARG00000034528


Danio rerio

Features
Gene ID: ENSDARG00000034528
  
Biological name :chodl
  
Synonyms : chodl / chondrolectin / Q568T5
  
Possible biological names infered from orthology : Q9CXM0 / Q9H9P2
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 24014880
Gene end: 24028235
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000041334
NCBI entrez gene - 550240     See in Manteia.
swissprot - Q568T5
ZFIN ID - ZDB-GENE-050417-36
Ensembl - ENSDARG00000034528
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHODLENSGALG00000015720Gallus gallus
 CHODLENSG00000154645Homo sapiens
 ChodlENSMUSG00000022860Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
layna / layilin a / LAYN* / Q6UX15* / Q8C351* / layilin*ENSDARG0000003516936
laynb / layilin b / LAYN* / Q6UX15* / Q8C351* / layilin*ENSDARG0000005683529


Protein motifs (from Interpro)
Interpro ID Name
 IPR001304  C-type lectin-like
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0007409 axonogenesis IMP
 biological_processGO:0008045 motor neuron axon guidance IGI
 biological_processGO:0050772 positive regulation of axonogenesis IGI
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0005179 MiP motor neuron MiP motor neuron axon decreased length , abnormal
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 ZFA:0009052 motor neuron motor neuron axon decreased length , abnormal
motor neuron axon decreased branchiness , abnormal
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 ZFA:0009243 CaP motoneuron CaP motoneuron axon decreased length , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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