ENSMUSG00000022860


Mus musculus

Features
Gene ID: ENSMUSG00000022860
  
Biological name :Chodl
  
Synonyms : Chodl / Chondrolectin / Q9CXM0
  
Possible biological names infered from orthology : Q9H9P2
  
Species: Mus musculus
  
Chr. number: 16
Strand: 1
Band: C3.1
Gene start: 78930948
Gene end: 78951733
  
Corresponding Affymetrix probe sets: 10436623 (MoGene1.0st)   1451440_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000023568
Ensembl peptide - ENSMUSP00000063961
Ensembl peptide - ENSMUSP00000109854
NCBI entrez gene - 246048     See in Manteia.
MGI - MGI:2179069
RefSeq - XM_006523032
RefSeq - NM_139134
RefSeq - XM_006523030
RefSeq - XM_006523031
RefSeq Peptide - NP_624360
swissprot - F2Z3Y6
swissprot - Q9CXM0
Ensembl - ENSMUSG00000022860
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chodlENSDARG00000034528Danio rerio
 CHODLENSGALG00000015720Gallus gallus
 CHODLENSG00000154645Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Layn / Q8C351 / layilin / Q6UX15*ENSMUSG0000006059445


Protein motifs (from Interpro)
Interpro ID Name
 IPR001304  C-type lectin-like
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0010975 regulation of neuron projection development IGI
 cellular_componentGO:0005737 cytoplasm ISO
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm ISS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr