ENSDARG00000035282


Danio rerio

Features
Gene ID: ENSDARG00000035282
  
Biological name :emc6
  
Synonyms : emc6 / ER membrane protein complex subunit 6 / Q6P0F0
  
Possible biological names infered from orthology : Q9BV81 / Q9CQW0
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 42122810
Gene end: 42123794
  
Corresponding Affymetrix probe sets: Dr.13110.1.A1_at (Zebrafish Array)   NM_200056_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000051134
NCBI entrez gene - 337220     See in Manteia.
RefSeq - NM_200056
RefSeq Peptide - NP_956350
swissprot - Q6P0F0
ZFIN ID - ZDB-GENE-030131-9164
Ensembl - ENSDARG00000035282
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EMC6ENSGALG00000026492Gallus gallus
 EMC6ENSG00000127774Homo sapiens
 Emc6ENSMUSG00000047260Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008504  ER membrane protein complex subunit 6
 IPR029008  Rab5-interacting protein family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IBA
 biological_processGO:0034975 protein folding in endoplasmic reticulum IBA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane ISS
 cellular_componentGO:0072546 ER membrane protein complex ISS
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr