ENSDARG00000035631


Danio rerio

Features
Gene ID: ENSDARG00000035631
  
Biological name :sdf2l1
  
Synonyms : sdf2l1 / stromal cell-derived factor 2-like 1
  
Possible biological names infered from orthology : Q9ESP1 / Q9HCN8 / Stromal cell-derived factor 2-like protein 1
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 13308531
Gene end: 13315726
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000113867
NCBI entrez gene - 445275     See in Manteia.
RefSeq - NM_001003730
RefSeq Peptide - NP_001003730
swissprot - A2BIR7
ZFIN ID - ZDB-GENE-040808-46
Ensembl - ENSDARG00000035631
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SDF2L1ENSGALG00000031982Gallus gallus
 Q9HCN8ENSG00000128228Homo sapiens
 Q9ESP1ENSMUSG00000022769Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sdf2 / stromal cell-derived factor 2 / Q99470*ENSDARG0000002402656


Protein motifs (from Interpro)
Interpro ID Name
 IPR016093  MIR motif
 IPR027005  Glycosyltransferase 39-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0035269 protein O-linked mannosylation IEA
 biological_processGO:0071712 ER-associated misfolded protein catabolic process IBA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IBA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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