ENSDARG00000036055


Danio rerio

Features
Gene ID: ENSDARG00000036055
  
Biological name :thap11
  
Synonyms : Q6TGZ4 / thap11 / THAP domain containing 11
  
Possible biological names infered from orthology : Q96EK4 / Q9JJD0 / THAP domain-containing protein 11
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 29041465
Gene end: 29043075
  
Corresponding Affymetrix probe sets: Dr.15768.1.A1_at (Zebrafish Array)   Dr.26426.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000052341
NCBI entrez gene - 406390     See in Manteia.
swissprot - Q6TGZ4
ZFIN ID - ZDB-GENE-040426-2121
Ensembl - ENSDARG00000036055
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 THAP11ENSGALG00000030657Gallus gallus
 Q96EK4ENSG00000168286Homo sapiens
 Q9JJD0ENSMUSG00000036442Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006612  THAP-type zinc finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding ISS
 molecular_functionGO:0008270 zinc ion binding ISS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain malformed , abnormal
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 ZFA:0000032 hypothalamus hypothalamus axon extension disrupted , abnormal
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 ZFA:0000100 cerebellum cerebellum axon extension disrupted , abnormal
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 ZFA:0001205 Meckel s cartilage Meckels cartilage immature , abnormal
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 ZFA:0001400 ceratohyal cartilage ceratohyal cartilage immature , abnormal
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 ZFA:0001516 ceratobranchial cartilage ceratobranchial cartilage immature , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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