ENSDARG00000036065


Danio rerio

Features
Gene ID: ENSDARG00000036065
  
Biological name :mgat1b
  
Synonyms : mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b / mgat1b
  
Possible biological names infered from orthology : Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase / mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase / MGAT1 / P26572 / P27808
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 27366932
Gene end: 27395531
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000145820
Ensembl peptide - ENSDARP00000094716
NCBI entrez gene - 558524     See in Manteia.
RefSeq - NM_001079971
RefSeq - XM_005170042
RefSeq Peptide - NP_001073440
swissprot - A3KQ03
ZFIN ID - ZDB-GENE-061103-589
Ensembl - ENSDARG00000036065
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MGAT1ENSG00000131446Homo sapiens
 Mgat1ENSMUSG00000020346Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mgat1a / mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase a / MGAT1* / P27808* / P26572* / Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase ...ENSDARG0000001240757
pomgnt1 / protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) / Q8WZA1* / Q91X88* / Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 *ENSDARG0000005202522


Protein motifs (from Interpro)
Interpro ID Name
 IPR004139  Glycosyl transferase, family 13
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008375 acetylglucosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA


Pathways (from Reactome)
Pathway description
N-glycan trimming and elongation in the cis-Golgi


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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