ENSDARG00000036135


Danio rerio

Features
Gene ID: ENSDARG00000036135
  
Biological name :bbox1
  
Synonyms : bbox1 / butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1
  
Possible biological names infered from orthology : Gamma-butyrobetaine dioxygenase / gamma-butyrobetaine hydroxylase 1 / O75936 / Q924Y0
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 34296789
Gene end: 34315291
  
Corresponding Affymetrix probe sets: Dr.6143.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000142742
Ensembl peptide - ENSDARP00000147754
Ensembl peptide - ENSDARP00000142900
Ensembl peptide - ENSDARP00000142760
Ensembl peptide - ENSDARP00000052470
NCBI entrez gene - 572649     See in Manteia.
RefSeq - XM_005168903
RefSeq - XM_005168904
RefSeq - XM_021477587
RefSeq - NM_001017717
RefSeq Peptide - NP_001017717
swissprot - A0A1D5NST2
swissprot - A0A1D5NSE6
swissprot - A0A1D5NSC9
swissprot - F1QR73
ZFIN ID - ZDB-GENE-050417-218
Ensembl - ENSDARG00000036135
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BBOX1ENSGALG00000013297Gallus gallus
 BBOX1ENSG00000129151Homo sapiens
 Bbox1ENSMUSG00000041660Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tmlhe / trimethyllysine hydroxylase, epsilon / Q9NVH6*ENSDARG0000007754720


Protein motifs (from Interpro)
Interpro ID Name
 IPR003819  TauD/TfdA-like domain
 IPR010376  Gamma-butyrobetaine hydroxylase-like, N-terminal
 IPR012775  Gamma-butyrobetaine hydroxylase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045329 carnitine biosynthetic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0008336 gamma-butyrobetaine dioxygenase activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA


Pathways (from Reactome)
Pathway description
Carnitine synthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000036135 bbox1 / butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1 / O75936* / Q924Y0* / Gamma-butyrobetaine dioxygenase * / gamma-butyrobetaine hydroxylase 1*  / complex






 

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