ENSDARG00000036139


Danio rerio

Features
Gene ID: ENSDARG00000036139
  
Biological name :lctla
  
Synonyms : lactase-like a / lctla
  
Possible biological names infered from orthology : lactase like / Lactase-like protein / LCTL / Q6UWM7 / Q8K1F9
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 34227075
Gene end: 34236091
  
Corresponding Affymetrix probe sets: Dr.12736.1.A1_at (Zebrafish Array)   NM_001002735_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000052476
Ensembl peptide - ENSDARP00000142786
Ensembl peptide - ENSDARP00000142769
NCBI entrez gene - 437008     See in Manteia.
RefSeq - NM_001002735
RefSeq Peptide - NP_001002735
swissprot - A0A1D5NSH1
swissprot - A0A1D5NSF4
swissprot - Q6DGC8
ZFIN ID - ZDB-GENE-040718-233
Ensembl - ENSDARG00000036139
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LCTLENSGALG00000045006Gallus gallus
 LCTLENSG00000188501Homo sapiens
 LctlENSMUSG00000032401Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lctlb / lactase-like b / LCTL* / Q6UWM7* / lactase like*ENSDARG0000001633776
lct / lactase / P09848*ENSDARG0000006067141
si:dkey-79p17.3 / LCT* / P09848* / lactase*ENSDARG0000009240441
kl / klotho / O35082* / Q9UEF7* / Klotho Klotho peptide*ENSDARG0000007986235
klb / klotho beta / Q86Z14* / Q99N32* / Beta-klotho *ENSDARG0000007629433
gba3 / glucosidase, beta, acid 3 (gene/pseudogene) / glucosylceramidase beta 3 (gene/pseudogene)*ENSDARG0000003115030


Protein motifs (from Interpro)
Interpro ID Name
 IPR001360  Glycoside hydrolase family 1
 IPR017853  Glycoside hydrolase superfamily
 IPR033132  Glycosyl hydrolases family 1, N-terminal conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:1901657 glycosyl compound metabolic process IBA
 cellular_componentGO:0005783 endoplasmic reticulum IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA
 molecular_functionGO:0008422 beta-glucosidase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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