ENSDARG00000036335


Danio rerio

Features
Gene ID: ENSDARG00000036335
  
Biological name :c1galt1c1
  
Synonyms : c1galt1c1 / C1GALT1-specific chaperone 1
  
Possible biological names infered from orthology : C1GALT1C1L / C1GALT1-specific chaperone 1 like / P0DN25 / Q96EU7 / Q9JMG2
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 33515515
Gene end: 33521071
  
Corresponding Affymetrix probe sets: Dr.3904.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000052788
NCBI entrez gene - 324052     See in Manteia.
RefSeq - NM_199667
RefSeq Peptide - NP_955961
swissprot - E7FBK8
ZFIN ID - ZDB-GENE-030131-2772
Ensembl - ENSDARG00000036335
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 C1GALT1C1ENSGALG00000008513Gallus gallus
 P0DN25ENSG00000223658Homo sapiens
 Q96EU7ENSG00000171155Homo sapiens
 Q9JMG2ENSMUSG00000048970Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
c1galt1a / core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1aENSDARG0000005558525
C1GALT1 (1 of many) / core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 / Q9NS00* / C1GALT1*ENSDARG0000009909824
c1galt1b / core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1bENSDARG0000005556123
si:dkey-202e17.1 / C1GALT1 (1 of many) / Q9JJ06* / Q9NS00* / C1GALT1* / Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 * / core 1 synthase, glycoprotein-N-acetylgalactosa...ENSDARG0000006227819
b3glctb / beta 3-glucosyltransferase b / Q8BHT6* / Q6Y288* / B3GLCT* / beta 3-glucosyltransferase* / Beta-1,3-glucosyltransferase *ENSDARG0000007774013
b3glcta / beta 3-glucosyltransferase a / Q8BHT6* / Q6Y288* / B3GLCT* / beta 3-glucosyltransferase* / Beta-1,3-glucosyltransferase *ENSDARG0000007391713


Protein motifs (from Interpro)
Interpro ID Name
 IPR026731  C1GALT1-specific chaperone 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016267 O-glycan processing, core 1 IBA
 molecular_functionGO:0016263 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IBA


Pathways (from Reactome)
Pathway description
O-linked glycosylation of mucins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000062278 si:dkey-202e17.1 / C1GALT1 (1 of many) / Q9JJ06* / Q9NS00* / C1GALT1* / Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 * / core 1 synthase, glycoprotein-N-acetylgalactosa...  / complex
 ENSDARG00000099098 C1GALT1 (1 of many) / core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 / Q9NS00* / C1GALT1*  / complex






 

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