ENSDARG00000036426


Danio rerio

Features
Gene ID: ENSDARG00000036426
  
Biological name :zgc:103586
  
Synonyms : zgc:103586
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 20518218
Gene end: 20521608
  
Corresponding Affymetrix probe sets: Dr.25811.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000052915
NCBI entrez gene - 492517     See in Manteia.
RefSeq - NM_001007389
RefSeq Peptide - NP_001007390
swissprot - F1QSJ0
ZFIN ID - ZDB-GENE-041114-88
Ensembl - ENSDARG00000036426
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cdaa / cytidine deaminase a / CDA* / P32320* / cytidine deaminase*ENSDARG0000011118853
cdab / cytidine deaminase b / CDA* / P32320* / P56389* / cytidine deaminase*ENSDARG0000003819953


Protein motifs (from Interpro)
Interpro ID Name
 IPR002125  Cytidine and deoxycytidylate deaminase domain
 IPR006262  Cytidine deaminase, homotetrameric
 IPR016192  APOBEC/CMP deaminase, zinc-binding
 IPR016193  Cytidine deaminase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009972 cytidine deamination IBA
 cellular_componentGO:0005829 cytosol IBA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004126 cytidine deaminase activity IBA
 molecular_functionGO:0008270 zinc ion binding IBA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr