ENSDARG00000038199


Danio rerio

Features
Gene ID: ENSDARG00000038199
  
Biological name :cdab
  
Synonyms : cdab / cytidine deaminase b
  
Possible biological names infered from orthology : CDA / cytidine deaminase / P32320 / P56389
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 3585934
Gene end: 3593118
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000055693
NCBI entrez gene - 402979     See in Manteia.
RefSeq - NM_205679
RefSeq Peptide - NP_991242
swissprot - Q6P0R4
ZFIN ID - ZDB-GENE-040426-1911
Ensembl - ENSDARG00000038199
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CDAENSGALG00000007382Gallus gallus
 CDAENSG00000158825Homo sapiens
 CdaENSMUSG00000028755Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cdaa / cytidine deaminase a / CDA* / P32320* / cytidine deaminase*ENSDARG0000011118861
zgc:103586ENSDARG0000003642644


Protein motifs (from Interpro)
Interpro ID Name
 IPR002125  Cytidine and deoxycytidylate deaminase domain
 IPR006262  Cytidine deaminase, homotetrameric
 IPR016192  APOBEC/CMP deaminase, zinc-binding
 IPR016193  Cytidine deaminase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009972 cytidine deamination IBA
 cellular_componentGO:0005829 cytosol IBA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004126 cytidine deaminase activity IBA
 molecular_functionGO:0008270 zinc ion binding IBA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation
Pyrimidine salvage


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000038199 cdab / cytidine deaminase b / CDA* / P32320* / P56389* / cytidine deaminase*  / complex






 

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