ENSDARG00000036942


Danio rerio

Features
Gene ID: ENSDARG00000036942
  
Biological name :gpd1c
  
Synonyms : glycerol-3-phosphate dehydrogenase 1c / gpd1c
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 317629
Gene end: 325584
  
Corresponding Affymetrix probe sets: Dr.2188.1.S1_at (Zebrafish Array)   NM_214753_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000113739
NCBI entrez gene - 406615     See in Manteia.
RefSeq - NM_214753
RefSeq Peptide - NP_999918
swissprot - Q7T3H5
ZFIN ID - ZDB-GENE-040426-2576
Ensembl - ENSDARG00000036942
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gpd1b / glycerol-3-phosphate dehydrogenase 1b / GPD1* / P13707* / P21695* / glycerol-3-phosphate dehydrogenase 1* / glycerol-3-phosphate dehydrogenase 1 (soluble)*ENSDARG0000004318075
gpd1l / Q5XIZ6 / glycerol-3-phosphate dehydrogenase 1 like / Q3ULJ0* / Q8N335*ENSDARG0000004002472
gpd1a / glycerol-3-phosphate dehydrogenase 1a / GPD1* / P13707* / P21695* / glycerol-3-phosphate dehydrogenase 1* / glycerol-3-phosphate dehydrogenase 1 (soluble)*ENSDARG0000004370172


Protein motifs (from Interpro)
Interpro ID Name
 IPR006109  Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal
 IPR006168  Glycerol-3-phosphate dehydrogenase, NAD-dependent
 IPR008927  6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily
 IPR011128  Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal
 IPR013328  6-phosphogluconate dehydrogenase, domain 2
 IPR016040  NAD(P)-binding domain
 IPR017751  Glycerol-3-phosphate dehydrogenase, NAD-dependent, eukaryotic


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0006072 glycerol-3-phosphate metabolic process IEA
 biological_processGO:0046168 glycerol-3-phosphate catabolic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0009331 glycerol-3-phosphate dehydrogenase complex IEA
 molecular_functionGO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0051287 NAD binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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