ENSDARG00000043180


Danio rerio

Features
Gene ID: ENSDARG00000043180
  
Biological name :gpd1b
  
Synonyms : glycerol-3-phosphate dehydrogenase 1b / gpd1b
  
Possible biological names infered from orthology : glycerol-3-phosphate dehydrogenase 1 / glycerol-3-phosphate dehydrogenase 1 (soluble) / GPD1 / P13707 / P21695
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 6996046
Gene end: 7006974
  
Corresponding Affymetrix probe sets: Dr.3275.1.A1_at (Zebrafish Array)   NM_199706_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000114396
NCBI entrez gene - 325181     See in Manteia.
RefSeq - NM_199706
RefSeq Peptide - NP_956000
swissprot - F1QGK0
ZFIN ID - ZDB-GENE-030131-3906
Ensembl - ENSDARG00000043180
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GPD1ENSG00000167588Homo sapiens
 Gpd1ENSMUSG00000023019Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gpd1a / glycerol-3-phosphate dehydrogenase 1a / GPD1* / P13707* / P21695* / glycerol-3-phosphate dehydrogenase 1* / glycerol-3-phosphate dehydrogenase 1 (soluble)*ENSDARG0000004370174
gpd1c / glycerol-3-phosphate dehydrogenase 1cENSDARG0000003694269
gpd1l / Q5XIZ6 / glycerol-3-phosphate dehydrogenase 1 like / Q3ULJ0* / Q8N335*ENSDARG0000004002466


Protein motifs (from Interpro)
Interpro ID Name
 IPR006109  Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal
 IPR006168  Glycerol-3-phosphate dehydrogenase, NAD-dependent
 IPR008927  6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily
 IPR011128  Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal
 IPR013328  6-phosphogluconate dehydrogenase, domain 2
 IPR016040  NAD(P)-binding domain
 IPR017751  Glycerol-3-phosphate dehydrogenase, NAD-dependent, eukaryotic


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0006072 glycerol-3-phosphate metabolic process IEA
 biological_processGO:0046168 glycerol-3-phosphate catabolic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0009331 glycerol-3-phosphate dehydrogenase complex IEA
 molecular_functionGO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0051287 NAD binding IEA


Pathways (from Reactome)
Pathway description
Synthesis of PA


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000043180 gpd1b / glycerol-3-phosphate dehydrogenase 1b / GPD1* / P13707* / P21695* / glycerol-3-phosphate dehydrogenase 1* / glycerol-3-phosphate dehydrogenase 1 (soluble)*  / complex
 ENSDARG00000043701 gpd1a / glycerol-3-phosphate dehydrogenase 1a / GPD1* / P13707* / P21695* / glycerol-3-phosphate dehydrogenase 1* / glycerol-3-phosphate dehydrogenase 1 (soluble)*  / complex






 

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