ENSDARG00000037020


Danio rerio

Features
Gene ID: ENSDARG00000037020
  
Biological name :kif1b
  
Synonyms : kif1b / kinesin family member 1B
  
Possible biological names infered from orthology : Kinesin-like protein KIF1B / O60333 / Q60575
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 29396182
Gene end: 29505645
  
Corresponding Affymetrix probe sets: Dr.3012.1.A1_at (Zebrafish Array)   DrAffx.1.7.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000117729
Ensembl peptide - ENSDARP00000050914
Ensembl peptide - ENSDARP00000053806
Ensembl peptide - ENSDARP00000114065
NCBI entrez gene - 369190     See in Manteia.
RefSeq - XM_009296825
RefSeq - XM_009296826
RefSeq - XM_009296831
RefSeq - NM_194382
RefSeq Peptide - NP_919363
swissprot - F1QJ64
swissprot - E9QDE5
swissprot - F1QBV5
ZFIN ID - ZDB-GENE-030820-1
Ensembl - ENSDARG00000037020
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 KIF1BENSGALG00000002726Gallus gallus
 KIF1BENSG00000054523Homo sapiens
 Kif1bENSMUSG00000063077Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
kif1c / kif1ab / kinesin family member 1Ab / KIF1A* / Q12756* / kinesin family member 1A*ENSDARG0000006202468
kif1aa / kinesin family member 1Aa / KIF1A* / Q12756* / kinesin family member 1A*ENSDARG0000006181767
kif13ba / kinesin family member 13Ba / KIF13B* / Q9NQT8* / kinesin family member 13B*ENSDARG0000007973128
kif13bb / kinesin family member 13Bb / KIF13B* / Q9NQT8* / kinesin family member 13B*ENSDARG0000007385928
kif13a / kinesin family member 13A / Q9H1H9*ENSDARG0000006959426
kif14 / kinesin family member 14 / L0N7N1* / Q15058* / Kinesin-like protein KIF14 *ENSDARG0000006218720
kif16bb / kinesin family member 16Bb / B1AVY7* / KIF16B* / Q96L93* / kinesin family member 16B* / Kinesin-like protein KIF16B *ENSDARG0000008001818
stard9 / StAR-related lipid transfer (START) domain containing 9 / Q9P2P6* / Q80TF6* / StAR-related lipid transfer protein 9 * / StAR related lipid transfer domain containing 9*ENSDARG0000009154818
kif16ba / kinesin family member 16Ba / B1AVY7* / KIF16B* / Q96L93* / kinesin family member 16B* / Kinesin-like protein KIF16B *ENSDARG0000010022516
CABZ01083944.1ENSDARG0000009865515
kif1c / kinesin family member 1CENSDARG0000005444811
si:ch73-375g18.1 / KIF1C* / O35071* / O43896* / kinesin family member 1C* / Kinesin-like protein KIF1C *ENSDARG0000007502411
si:rp71-84d9.1 / Kif28*ENSDARG0000007668710
kif28 / kinesin family member 28ENSDARG000000915855


Protein motifs (from Interpro)
Interpro ID Name
 IPR000253  Forkhead-associated (FHA) domain
 IPR001752  Kinesin motor domain
 IPR001849  Pleckstrin homology domain
 IPR008984  SMAD/FHA domain superfamily
 IPR011993  PH-like domain superfamily
 IPR019821  Kinesin motor domain, conserved site
 IPR022140  Kinesin-like KIF1-type
 IPR022164  Kinesin-like
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR032405  Kinesin-associated


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007018 microtubule-based movement IEA
 biological_processGO:0008298 intracellular mRNA localization IMP
 biological_processGO:0030099 myeloid cell differentiation IMP
 biological_processGO:0030225 macrophage differentiation IMP
 biological_processGO:0030705 cytoskeleton-dependent intracellular transport IBA
 biological_processGO:0048675 axon extension IMP
 biological_processGO:0048917 posterior lateral line ganglion development IMP
 biological_processGO:0048918 posterior lateral line nerve development IMP
 biological_processGO:1990535 neuron projection maintenance IMP
 cellular_componentGO:0005871 kinesin complex IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003774 motor activity IEA
 molecular_functionGO:0003777 microtubule motor activity IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0016887 ATPase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000029 hindbrain hindbrain oligodendrocyte morphology , abnormal
hindbrain compact myelin decreased amount , abnormal
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 ZFA:0000075 spinal cord spinal cord oligodendrocyte morphology , abnormal
spinal cord axon decreased length , abnormal
spinal cord axon decreased amount , abnormal
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 ZFA:0000076 swim bladder swim bladder collapsed , abnormal
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 ZFA:0000094 blood island blood island has fewer parts of type macrophage , abnormal
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 ZFA:0000175 posterior lateral line nerve posterior lateral line nerve decreased length , abnormal
Show

 ZFA:0001058 caudal fin caudal fin has fewer parts of type caudal fin axon, abnormal
Show

 ZFA:0001094 whole organism whole organism lethal (sensu genetics) , abnormal
Show

 ZFA:0009323 thrombocyte thrombocyte decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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