ENSDARG00000037393


Danio rerio

Features
Gene ID: ENSDARG00000037393
  
Biological name :slc43a1a
  
Synonyms : slc43a1a / solute carrier family 43 (amino acid system L transporter), member 1a
  
Possible biological names infered from orthology : O75387 / Q8BSM7 / SLC43A1 / solute carrier family 43 member 1
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 22076596
Gene end: 22098011
  
Corresponding Affymetrix probe sets: Dr.11296.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000096925
Ensembl peptide - ENSDARP00000139447
Ensembl peptide - ENSDARP00000135429
NCBI entrez gene - 334395     See in Manteia.
RefSeq - NM_001327986
RefSeq Peptide - NP_001314915
swissprot - A0A0R4ITU9
swissprot - A0A0R4IKE6
swissprot - F2Z4V7
ZFIN ID - ZDB-GENE-030131-6327
Ensembl - ENSDARG00000037393
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 O75387ENSG00000149150Homo sapiens
 Q8BSM7ENSMUSG00000027075Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc43a1b / solute carrier family 43 (amino acid system L transporter), member 1b / O75387* / Q8BSM7* / SLC43A1* / solute carrier family 43 member 1*ENSDARG0000003774866
slc43a2b / solute carrier family 43 (amino acid system L transporter), member 2b / Q8CGA3* / Q8N370* / SLC43A2* / solute carrier family 43 member 2*ENSDARG0000006112057
slc43a2a / solute carrier family 43 (amino acid system L transporter), member 2a / Q8CGA3* / Q8N370* / SLC43A2* / solute carrier family 43 member 2*ENSDARG0000003684856
slc43a3b / solute carrier family 43, member 3b / A2AVZ9* / Q8NBI5* / SLC43A3* / AP000781.2* / solute carrier family 43 member 3*ENSDARG0000005794920
slc43a3a / solute carrier family 43, member 3a / A2AVZ9* / Q8NBI5* / SLC43A3* / AP000781.2* / solute carrier family 43 member 3*ENSDARG0000005968220


Protein motifs (from Interpro)
Interpro ID Name
 IPR011701  Major facilitator superfamily
 IPR020846  Major facilitator superfamily domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015804 neutral amino acid transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0072015 glomerular visceral epithelial cell development IMP
 biological_processGO:1902475 L-alpha-amino acid transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015175 neutral amino acid transmembrane transporter activity IBA
 molecular_functionGO:0015179 L-amino acid transmembrane transporter activity IBA


Pathways (from Reactome)
Pathway description
Amino acid transport across the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0001094 whole organism whole organism edematous , abnormal
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 ZFA:0001288 renal glomerulus renal glomerulus collapsed , abnormal
renal glomerulus basement membrane increased thickness , abnormal
renal glomerulus basement membrane disorganized , abnormal
renal glomerulus lamina densa morphology , abnormal
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 ZFA:0009015 erythroid progenitor cell erythroid progenitor cell decreased amount , abnormal
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 ZFA:0009285 podocyte podocyte malformed , abnormal
podocyte variant shape , abnormal
podocyte increased variability of size , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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