ENSDARG00000059682


Danio rerio

Features
Gene ID: ENSDARG00000059682
  
Biological name :slc43a3a
  
Synonyms : slc43a3a / solute carrier family 43, member 3a
  
Possible biological names infered from orthology : A2AVZ9 / AP000781.2 / Q8NBI5 / SLC43A3 / solute carrier family 43 member 3
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 44141758
Gene end: 44161417
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000130308
Ensembl peptide - ENSDARP00000077648
NCBI entrez gene - 572234     See in Manteia.
RefSeq - NM_001201344
RefSeq Peptide - NP_001188273
swissprot - E7F4C3
ZFIN ID - ZDB-GENE-110208-8
Ensembl - ENSDARG00000059682
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000030316Gallus gallus
 ENSGALG00000020479Gallus gallus
 AP000781.2ENSG00000254979Homo sapiens
 Q8NBI5ENSG00000134802Homo sapiens
 A2AVZ9ENSMUSG00000027074Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc43a3b / solute carrier family 43, member 3b / A2AVZ9* / Q8NBI5* / SLC43A3* / AP000781.2* / solute carrier family 43 member 3*ENSDARG0000005794962
slc43a2a / solute carrier family 43 (amino acid system L transporter), member 2a / Q8CGA3* / Q8N370* / SLC43A2* / solute carrier family 43 member 2*ENSDARG0000003684822
slc43a2b / solute carrier family 43 (amino acid system L transporter), member 2b / Q8CGA3* / Q8N370* / SLC43A2* / solute carrier family 43 member 2*ENSDARG0000006112022
slc43a1a / solute carrier family 43 (amino acid system L transporter), member 1a / O75387* / Q8BSM7* / SLC43A1* / solute carrier family 43 member 1*ENSDARG0000003739321
slc43a1b / solute carrier family 43 (amino acid system L transporter), member 1b / O75387* / Q8BSM7* / SLC43A1* / solute carrier family 43 member 1*ENSDARG0000003774820


Protein motifs (from Interpro)
Interpro ID Name
 IPR011701  Major facilitator superfamily
 IPR020846  Major facilitator superfamily domain
 IPR027197  Solute carrier family 43 member 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000151 pronephros pronephros cystic , abnormal
Show

 ZFA:0001094 whole organism whole organism anterior-posterior axis curved , abnormal
Show

 ZFA:0001261 ventricular system ventricular system hydrocephalic , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr