ENSDARG00000038360


Danio rerio

Features
Gene ID: ENSDARG00000038360
  
Biological name :thg1l
  
Synonyms : thg1l / tRNA-histidine guanylyltransferase 1-like
  
Possible biological names infered from orthology : Q9CY52 / Q9NWX6 / tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 6535426
Gene end: 6540646
  
Corresponding Affymetrix probe sets: Dr.16865.1.S1_at (Zebrafish Array)   Dr.16865.2.S1_at (Zebrafish Array)   NM_001007455_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000055960
NCBI entrez gene - 492814     See in Manteia.
RefSeq - NM_001007455
RefSeq Peptide - NP_001007456
swissprot - F1R9P0
ZFIN ID - ZDB-GENE-041114-170
Ensembl - ENSDARG00000038360
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 THG1LENSGALG00000003722Gallus gallus
 THG1LENSG00000113272Homo sapiens
 Thg1lENSMUSG00000011254Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007537  tRNAHis guanylyltransferase Thg1
 IPR024956  tRNAHis guanylyltransferase catalytic domain
 IPR025845  Thg1 C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006400 tRNA modification IEA
 biological_processGO:0008033 tRNA processing IBA
 biological_processGO:0099116 tRNA 5"-end processing IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0000287 magnesium ion binding IEA
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0008193 tRNA guanylyltransferase activity IBA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016779 nucleotidyltransferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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