ENSDARG00000038563


Danio rerio

Features
Gene ID: ENSDARG00000038563
  
Biological name :pitrm1
  
Synonyms : pitrilysin metallopeptidase 1 / pitrm1
  
Possible biological names infered from orthology : Presequence protease, mitochondrial / Q5JRX3 / Q8K411
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 48089057
Gene end: 48119409
  
Corresponding Affymetrix probe sets: Dr.84.1.S1_at (Zebrafish Array)   NM_213487_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000056293
NCBI entrez gene - 406808     See in Manteia.
RefSeq - NM_213487
RefSeq Peptide - NP_998652
swissprot - F1QNA0
ZFIN ID - ZDB-GENE-040426-2876
Ensembl - ENSDARG00000038563
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PITRM1ENSGALG00000007036Gallus gallus
 PITRM1ENSG00000107959Homo sapiens
 Pitrm1ENSMUSG00000021193Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007863  Peptidase M16, C-terminal
 IPR011249  Metalloenzyme, LuxS/M16 peptidase-like
 IPR011765  Peptidase M16, N-terminal
 IPR013578  Peptidase M16C associated


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Mitochondrial protein import


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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