ENSDARG00000038956


Danio rerio

Features
Gene ID: ENSDARG00000038956
  
Biological name :fdx1b
  
Synonyms : fdx1b / ferredoxin 1b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 22177033
Gene end: 22226645
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000115368
NCBI entrez gene - 562135     See in Manteia.
RefSeq - NM_001100949
RefSeq Peptide - NP_001094419
swissprot - A2BGD1
ZFIN ID - ZDB-GENE-060526-382
Ensembl - ENSDARG00000038956
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000031360Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fdx1 / ferredoxin 1 / P10109* / P46656*ENSDARG0000005641045
fdx1l / ferredoxin 1-like / FDX2* / Q6P4F2* / AC011511.1* / ferredoxin 2*ENSDARG0000005219025


Protein motifs (from Interpro)
Interpro ID Name
 IPR001041  2Fe-2S ferredoxin-type iron-sulfur binding domain
 IPR001055  Adrenodoxin
 IPR012675  Beta-grasp domain superfamily
 IPR018298  Adrenodoxin, iron-sulphur binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006694 steroid biosynthetic process IMP
 biological_processGO:0022900 electron transport chain IEA
 biological_processGO:0034651 cortisol biosynthetic process IMP
 molecular_functionGO:0009055 electron transfer activity IEA
 molecular_functionGO:0051536 iron-sulfur cluster binding IEA
 molecular_functionGO:0051537 2 iron, 2 sulfur cluster binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism increased amount , abnormal
whole organism decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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