ENSDARG00000039130


Danio rerio

Features
Gene ID: ENSDARG00000039130
  
Biological name :cdkn3
  
Synonyms : cdkn3 / cyclin-dependent kinase inhibitor 3
  
Possible biological names infered from orthology : Q16667 / Q810P3
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 36612930
Gene end: 36621926
  
Corresponding Affymetrix probe sets: Dr.24317.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000057154
NCBI entrez gene - 402796     See in Manteia.
RefSeq - NM_001145681
RefSeq - XM_005156990
RefSeq Peptide - NP_001139153
swissprot - B8A6D9
ZFIN ID - ZDB-GENE-060427-2
Ensembl - ENSDARG00000039130
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CDKN3ENSGALG00000012220Gallus gallus
 CDKN3ENSG00000100526Homo sapiens
 Cdkn3ENSMUSG00000037628Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000242  PTP type protein phosphatase
 IPR000387  Tyrosine specific protein phosphatases domain
 IPR003595  Protein-tyrosine phosphatase, catalytic
 IPR008425  Cyclin-dependent kinase inhibitor 3
 IPR016130  Protein-tyrosine phosphatase, active site
 IPR022778  CDKN3 domain
 IPR029021  Protein-tyrosine phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000082 G1/S transition of mitotic cell cycle IBA
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007050 cell cycle arrest IBA
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0035335 peptidyl-tyrosine dephosphorylation IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0004721 phosphoprotein phosphatase activity IEA
 molecular_functionGO:0004722 protein serine/threonine phosphatase activity IBA
 molecular_functionGO:0004725 protein tyrosine phosphatase activity IBA
 molecular_functionGO:0008138 protein tyrosine/serine/threonine phosphatase activity IBA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016791 phosphatase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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