ENSDARG00000039310


Danio rerio

Features
Gene ID: ENSDARG00000039310
  
Biological name :parla
  
Synonyms : parla / presenilin associated, rhomboid-like a
  
Possible biological names infered from orthology : AC131160.1 / PARL / presenilin associated rhomboid like / Presenilins-associated rhomboid-like protein, mitochondrial P-beta / Q5XJY4 / Q9H300
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 5543901
Gene end: 5561019
  
Corresponding Affymetrix probe sets: Dr.20668.1.A1_at (Zebrafish Array)   NM_001014298_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000057438
Ensembl peptide - ENSDARP00000127426
Ensembl peptide - ENSDARP00000112696
NCBI entrez gene - 541485     See in Manteia.
RefSeq - NM_001014298
RefSeq Peptide - NP_001014320
swissprot - B8JLG7
swissprot - B8JLG6
swissprot - U3JB04
ZFIN ID - ZDB-GENE-050327-8
Ensembl - ENSDARG00000039310
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000002315Gallus gallus
 AC131160.1ENSG00000283765Homo sapiens
 PARLENSG00000175193Homo sapiens
 ParlENSMUSG00000033918Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LO018197.1 / PARL* / Q9H300* / AC131160.1* / presenilin associated rhomboid like*ENSDARG0000002089151


Protein motifs (from Interpro)
Interpro ID Name
 IPR022764  Peptidase S54, rhomboid domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004252 serine-type endopeptidase activity IEA


Pathways (from Reactome)
Pathway description
Processing of SMDT1


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000633 caudal tuberculum caudal tuberculum dopaminergic neuron dead , abnormal
caudal tuberculum dopaminergic neuron disheveled , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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