ENSDARG00000039681


Danio rerio

Features
Gene ID: ENSDARG00000039681
  
Biological name :samm50l
  
Synonyms : samm50l / sorting and assembly machinery component 50 homolog, like
  
Possible biological names infered from orthology : Q8BGH2 / Q9Y512 / SAMM50 / SAMM50 sorting and assembly machinery component / Sorting and assembly machinery component 50 homolog
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 9011448
Gene end: 9025993
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000058006
Ensembl peptide - ENSDARP00000155177
NCBI entrez gene - 492471     See in Manteia.
RefSeq - NM_001007343
RefSeq Peptide - NP_001007344
swissprot - F1R2U1
ZFIN ID - ZDB-GENE-041114-30
Ensembl - ENSDARG00000039681
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SAMM50ENSGALG00000014194Gallus gallus
 Q9Y512ENSG00000100347Homo sapiens
 Q8BGH2ENSMUSG00000022437Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
samm50 / SAMM50 sorting and assembly machinery component / Q8BGH2* / Q9Y512* / Sorting and assembly machinery component 50 homolog *ENSDARG0000004581483


Protein motifs (from Interpro)
Interpro ID Name
 IPR000184  Bacterial surface antigen (D15)
 IPR034746  POTRA domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0019867 outer membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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