ENSDARG00000039980


Danio rerio

Features
Gene ID: ENSDARG00000039980
  
Biological name :ppt1
  
Synonyms : palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile) / ppt1
  
Possible biological names infered from orthology : O88531 / P50897 / palmitoyl-protein thioesterase 1
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 43736269
Gene end: 43757568
  
Corresponding Affymetrix probe sets: Dr.14688.1.S1_at (Zebrafish Array)   NM_213339_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000126240
Ensembl peptide - ENSDARP00000126214
Ensembl peptide - ENSDARP00000139466
Ensembl peptide - ENSDARP00000058490
NCBI entrez gene - 406648     See in Manteia.
RefSeq - NM_213339
RefSeq Peptide - NP_998504
swissprot - F1R8J6
swissprot - I3ITF0
swissprot - I3ITH5
ZFIN ID - ZDB-GENE-040426-2653
Ensembl - ENSDARG00000039980
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PPT1ENSGALG00000003936Gallus gallus
 PPT1ENSG00000131238Homo sapiens
 Ppt1ENSMUSG00000028657Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:66024 / si:ch73-95l15.3ENSDARG0000006884020
zgc:66024 / si:ch73-95l15.3ENSDARG0000006884619
zgc:55621ENSDARG0000001078219
ppt2 / palmitoyl-protein thioesterase 2 / O35448* / Q9UMR5* / PPT2-EGFL8* / Lysosomal thioesterase PPT2 * / PPT2-EGFL8 readthrough (NMD candidate)*ENSDARG0000010454218
zgc:55413 / zgc:77118ENSDARG0000009317618
zgc:55413 / zgc:77118ENSDARG0000001420816


Protein motifs (from Interpro)
Interpro ID Name
 IPR002472  Palmitoyl protein thioesterase
 IPR029058  Alpha/Beta hydrolase fold
 IPR030294  Palmitoyl-protein thioesterase 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002084 protein depalmitoylation IBA
 biological_processGO:0006898 receptor-mediated endocytosis IBA
 cellular_componentGO:0005764 lysosome IBA
 molecular_functionGO:0008474 palmitoyl-(protein) hydrolase activity IBA
 molecular_functionGO:0098599 palmitoyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Fatty acyl-CoA biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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