ENSDARG00000040070


Danio rerio

Features
Gene ID: ENSDARG00000040070
  
Biological name :coil
  
Synonyms : coil / coilin p80
  
Possible biological names infered from orthology : coilin / P38432
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 36119782
Gene end: 36127234
  
Corresponding Affymetrix probe sets: Dr.8425.1.S1_at (Zebrafish Array)   NM_131512_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000109892
NCBI entrez gene - 58024     See in Manteia.
RefSeq - NM_131512
RefSeq Peptide - NP_571587
swissprot - B0S7K8
ZFIN ID - ZDB-GENE-000330-8
Ensembl - ENSDARG00000040070
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 COILENSGALG00000003158Gallus gallus
 COILENSG00000121058Homo sapiens
 CoilENSMUSG00000033983Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR024822  Coilin
 IPR031722  Coilin, N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000387 spliceosomal snRNP assembly IMP
 biological_processGO:0030576 Cajal body organization IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism cell dead , abnormal
whole organism cell apoptotic , abnormal
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 ZFA:0009000 cell cell Cajal body decreased amount , abnormal
cell small nuclear ribonucleoprotein complex dispersed , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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