ENSMUSG00000033983


Mus musculus

Features
Gene ID: ENSMUSG00000033983
  
Biological name :Coil
  
Synonyms : Coil / coilin
  
Possible biological names infered from orthology : P38432
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: C
Gene start: 88970252
Gene end: 88991613
  
Corresponding Affymetrix probe sets: 10380250 (MoGene1.0st)   10380252 (MoGene1.0st)   1416692_at (Mouse Genome 430 2.0 Array)   1419106_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000103530
Ensembl peptide - ENSMUSP00000047588
NCBI entrez gene - 12812     See in Manteia.
MGI - MGI:104842
RefSeq - NM_016706
RefSeq Peptide - NP_057915
swissprot - E9Q284
Ensembl - ENSMUSG00000033983
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 coilENSDARG00000040070Danio rerio
 COILENSGALG00000003158Gallus gallus
 COILENSG00000121058Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR024822  Coilin
 IPR031722  Coilin, N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0015030 Cajal body IEA
 cellular_componentGO:0016604 nuclear body IEA
 molecular_functionGO:0008022 protein C-terminus binding IEA
 molecular_functionGO:0042802 identical protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0008770 decreased survivor rate "a smaller percentage of organisms than expected survive to adulthood and have a lifespan similar to controls" [MGI:llw2 "Linda Washburn, Mouse Genome Informatics Curator"]
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Allelic Composition: Slc12a2tm2Bhk/Slc12a2tm2Bhk
Genetic Background: involves: 129P2/OlaHsd * C57BL/6J * DBA/2J

 MP:0008888 abnormal Cajal body morphology "alteration in structure, number or location of subnuclear structures involved in snRNP biogenesis and in the trafficking of snoRNPs and snRNPs" [https://npd.hgu.mrc.ac.uk/compartments.html, MGI:llw2 "Linda Washburn, Mouse Genome Informatics Curator"]
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Allelic Composition: Slc12a2tm2Bhk/Slc12a2tm2Bhk
Genetic Background: involves: 129P2/OlaHsd * C57BL/6J * DBA/2J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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