ENSDARG00000040306


Danio rerio

Features
Gene ID: ENSDARG00000040306
  
Biological name :otomp
  
Synonyms : otolith matrix protein / otomp / Q0VIL3
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 41504752
Gene end: 41518340
  
Corresponding Affymetrix probe sets: Dr.19416.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000106982
NCBI entrez gene - 565818     See in Manteia.
RefSeq - NM_001045087
RefSeq Peptide - NP_001038552
swissprot - F1QFL7
swissprot - Q0VIL3
ZFIN ID - ZDB-GENE-040709-1
Ensembl - ENSDARG00000040306
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
meltf / melanotransferrin / P08582* / Q9R0R1*ENSDARG0000007515938
zgc:172271ENSDARG0000001324033
tfa / transferrin-a / TF* / Trf* / LTF* / Q921I1* / P02787* / P02788* / P08071* / Q9DBD0* / Gm20425* / transferrin* / 1300017J02Rik* / Serotransferrin * / lactotransferrin* / RIKEN cDNA 130...ENSDARG0000001677128


Protein motifs (from Interpro)
Interpro ID Name
 IPR001156  Transferrin-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048840 otolith development IMP
 cellular_componentGO:0005576 extracellular region IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001617 otolith otolith decreased size , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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