ENSDARG00000040350


Danio rerio

Features
Gene ID: ENSDARG00000040350
  
Biological name :rpp38
  
Synonyms : ribonuclease P/MRP 38 subunit / rpp38
  
Possible biological names infered from orthology : P78345 / ribonuclease P/MRP subunit p38
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 28592495
Gene end: 28594181
  
Corresponding Affymetrix probe sets: Dr.19457.1.S1_at (Zebrafish Array)   NM_001002525_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000059052
Ensembl peptide - ENSDARP00000157126
NCBI entrez gene - 436798     See in Manteia.
RefSeq - NM_001002525
RefSeq Peptide - NP_001002525
swissprot - F1QS85
ZFIN ID - ZDB-GENE-040718-258
Ensembl - ENSDARG00000040350
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPP38ENSGALG00000008794Gallus gallus
 RPP38ENSG00000152464Homo sapiens
 Rpp38ENSMUSG00000049950Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004038  Ribosomal protein L7Ae/L30e/S12e/Gadd45
 IPR029064  50S ribosomal protein L30e-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005655 nucleolar ribonuclease P complex IBA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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