ENSG00000152464


Homo sapiens

Features
Gene ID: ENSG00000152464
  
Biological name :RPP38
  
Synonyms : P78345 / ribonuclease P/MRP subunit p38 / RPP38
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: 1
Band: p13
Gene start: 15097180
Gene end: 15139818
  
Corresponding Affymetrix probe sets: 205562_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000402635
Ensembl peptide - ENSP00000367439
Ensembl peptide - ENSP00000367443
Ensembl peptide - ENSP00000367444
Ensembl peptide - ENSP00000478982
Ensembl peptide - ENSP00000367445
NCBI entrez gene - 10557     See in Manteia.
OMIM - 606116
RefSeq - XM_017015481
RefSeq - NM_001097590
RefSeq - NM_001265601
RefSeq - NM_006414
RefSeq - NM_183005
RefSeq - XM_006717363
RefSeq - XM_006717364
RefSeq - XM_011519293
RefSeq - XM_017015479
RefSeq - XM_017015480
RefSeq Peptide - NP_006405
RefSeq Peptide - NP_001091059
RefSeq Peptide - NP_001252530
RefSeq Peptide - NP_892117
swissprot - Q5VUC3
swissprot - P78345
swissprot - Q5VUC9
Ensembl - ENSG00000152464
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpp38ENSDARG00000040350Danio rerio
 RPP38ENSGALG00000008794Gallus gallus
 Rpp38ENSMUSG00000049950Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004038  Ribosomal protein L7Ae/L30e/S12e/Gadd45
 IPR029064  50S ribosomal protein L30e-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001682 tRNA 5"-leader removal TAS
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0090501 RNA phosphodiester bond hydrolysis IEA
 biological_processGO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEA
 cellular_componentGO:0001650 fibrillar center IDA
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005655 nucleolar ribonuclease P complex TAS
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0004526 ribonuclease P activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
tRNA processing in the nucleus
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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