ENSDARG00000040730


Danio rerio

Features
Gene ID: ENSDARG00000040730
  
Biological name :wdr75
  
Synonyms : Q7ZVR1 / wdr75 / WD repeat domain 75
  
Possible biological names infered from orthology : Q3U821 / Q8IWA0
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 41120158
Gene end: 41156972
  
Corresponding Affymetrix probe sets: Dr.3557.1.S1_at (Zebrafish Array)   NM_200090_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000059666
NCBI entrez gene - 368478     See in Manteia.
RefSeq - NM_200090
RefSeq Peptide - NP_956384
swissprot - Q7ZVR1
ZFIN ID - ZDB-GENE-030616-5
Ensembl - ENSDARG00000040730
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000045237Gallus gallus
 ENSGALG00000042197Gallus gallus
 WDR75ENSG00000115368Homo sapiens
 Wdr75ENSMUSG00000025995Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011047  Quinoprotein alcohol dehydrogenase-like superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0042254 ribosome biogenesis IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain necrotic , abnormal
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 ZFA:0000012 central nervous system central nervous system necrotic , abnormal
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 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary condensed , abnormal
midbrain hindbrain boundary quality , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000112 gut gut hypoplastic , abnormal
gut quality , abnormal
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 ZFA:0001114 head head flat , abnormal
head decreased size , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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