ENSDARG00000040815


Danio rerio

Features
Gene ID: ENSDARG00000040815
  
Biological name :tsku
  
Synonyms : tsku / tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)
  
Possible biological names infered from orthology : Q8CBR6 / Q8WUA8 / tsukushi, small leucine rich proteoglycan
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 29343280
Gene end: 29354020
  
Corresponding Affymetrix probe sets: Dr.7538.1.S1_at (Zebrafish Array)   NM_199733_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000110663
Ensembl peptide - ENSDARP00000113704
NCBI entrez gene - 325958     See in Manteia.
RefSeq - NM_001319185
RefSeq - NM_199733
RefSeq Peptide - NP_001306114
RefSeq Peptide - NP_956027
swissprot - F1QUL3
ZFIN ID - ZDB-GENE-030131-4683
Ensembl - ENSDARG00000040815
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TSKUENSGALG00000000761Gallus gallus
 TSKUENSG00000182704Homo sapiens
 TskuENSMUSG00000049580Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr