ENSDARG00000040965


Danio rerio

Features
Gene ID: ENSDARG00000040965
  
Biological name :zgc:101731
  
Synonyms : zgc:101731
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 29123031
Gene end: 29138266
  
Corresponding Affymetrix probe sets: Dr.24073.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000060029
Ensembl peptide - ENSDARP00000117921
Ensembl peptide - ENSDARP00000124630
NCBI entrez gene - 447892     See in Manteia.
RefSeq - XM_005157730
RefSeq Peptide - NP_001020729
swissprot - F8W2R9
swissprot - Q4V9B6
ZFIN ID - ZDB-GENE-040912-57
Ensembl - ENSDARG00000040965
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6PC54 / Q5TZ66 / snap25a / snap25b / synaptosomal-associated protein, 25b / P60879* / SNAP25* / P60880* / synaptosome associated protein 25* / Mus musculus synaptosomal-associated protein ...ENSDARG0000005811769
Q5TZ66 / snap25a / synaptosomal-associated protein, 25a / P60879* / SNAP25* / P60880* / synaptosome associated protein 25* / Mus musculus synaptosomal-associated protein 25 (Snap25), transc...ENSDARG0000002060967
snap23.1 / synaptosomal-associated protein 23.1 / O09044* / SNAP23* / O00161* / synaptosome associated protein 23* / synaptosomal-associated protein 23*ENSDARG0000001287454
snap23.2 / synaptosomal-associated protein 23.2 / O09044* / SNAP23* / O00161* / synaptosome associated protein 23* / synaptosomal-associated protein 23*ENSDARG0000005525231


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR000928  SNAP-25


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016082 synaptic vesicle priming IBA
 biological_processGO:0031629 synaptic vesicle fusion to presynaptic active zone membrane IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0031201 SNARE complex IBA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0005484 SNAP receptor activity IBA
 molecular_functionGO:0019905 syntaxin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr