ENSDARG00000012874


Danio rerio

Features
Gene ID: ENSDARG00000012874
  
Biological name :snap23.1
  
Synonyms : snap23.1 / synaptosomal-associated protein 23.1
  
Possible biological names infered from orthology : O00161 / O09044 / SNAP23 / synaptosomal-associated protein 23 / synaptosome associated protein 23
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 33415319
Gene end: 33433097
  
Corresponding Affymetrix probe sets: Dr.16959.1.S1_at (Zebrafish Array)   NM_200190_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000113920
Ensembl peptide - ENSDARP00000155545
Ensembl peptide - ENSDARP00000141382
Ensembl peptide - ENSDARP00000114935
Ensembl peptide - ENSDARP00000014467
NCBI entrez gene - 393159     See in Manteia.
RefSeq - NM_200190
RefSeq Peptide - NP_956484
swissprot - E9QDK6
swissprot - A0A0R4IW20
swissprot - E9QI05
swissprot - Q7ZVE4
ZFIN ID - ZDB-GENE-040426-883
Ensembl - ENSDARG00000012874
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SNAP23ENSGALG00000009097Gallus gallus
 O00161ENSG00000092531Homo sapiens
 O09044ENSMUSG00000027287Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6PC54 / Q5TZ66 / snap25a / snap25b / synaptosomal-associated protein, 25b / P60879* / SNAP25* / P60880* / synaptosome associated protein 25* / Mus musculus synaptosomal-associated protein ...ENSDARG0000005811753
zgc:101731ENSDARG0000004096553
Q5TZ66 / snap25a / synaptosomal-associated protein, 25a / P60879* / SNAP25* / P60880* / synaptosome associated protein 25* / Mus musculus synaptosomal-associated protein 25 (Snap25), transc...ENSDARG0000002060951
snap23.2 / synaptosomal-associated protein 23.2 / O09044* / SNAP23* / O00161* / synaptosome associated protein 23* / synaptosomal-associated protein 23*ENSDARG0000005525240


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR000928  SNAP-25


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016082 synaptic vesicle priming IBA
 biological_processGO:0031629 synaptic vesicle fusion to presynaptic active zone membrane IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0031201 SNARE complex IBA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0005484 SNAP receptor activity IBA
 molecular_functionGO:0019905 syntaxin binding IBA


Pathways (from Reactome)
Pathway description
Clathrin derived vesicle budding
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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