ENSDARG00000041720


Danio rerio

Features
Gene ID: ENSDARG00000041720
  
Biological name :arpc5la
  
Synonyms : actin related protein 2/3 complex, subunit 5-like, a / arpc5la
  
Possible biological names infered from orthology : actin related protein 2/3 complex subunit 5 like / Actin-related protein 2/3 complex subunit 5-like protein / ARPC5L / Q9BPX5 / Q9D898
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 41453691
Gene end: 41462732
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000061143
NCBI entrez gene - 393550     See in Manteia.
RefSeq - NM_200578
RefSeq Peptide - NP_956872
swissprot - Q6P0D3
ZFIN ID - ZDB-GENE-040426-1453
Ensembl - ENSDARG00000041720
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ARPC5LENSGALG00000001014Gallus gallus
 ARPC5LENSG00000136950Homo sapiens
 Arpc5lENSMUSG00000026755Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
arpc5lb / actin related protein 2/3 complex, subunit 5-like, b / Q9D898* / ARPC5L* / Q9BPX5* / actin related protein 2/3 complex subunit 5 like* / Actin-related protein 2/3 complex subunit ...ENSDARG0000003543384
arpc5a / actin related protein 2/3 complex, subunit 5A / ARPC5* / O15511* / Q9CPW4* / actin related protein 2/3 complex subunit 5*ENSDARG0000003914267
arpc5b / actin related protein 2/3 complex, subunit 5B / ARPC5* / O15511* / Q9CPW4* / actin related protein 2/3 complex subunit 5*ENSDARG0000001906267


Protein motifs (from Interpro)
Interpro ID Name
 IPR006789  Actin-related protein 2/3 complex subunit 5
 IPR030075  Actin-related protein 2/3 complex subunit 5-like protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030833 regulation of actin filament polymerization IEA
 biological_processGO:0034314 Arp2/3 complex-mediated actin nucleation IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005885 Arp2/3 protein complex IEA
 cellular_componentGO:0015629 actin cytoskeleton IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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