ENSMUSG00000026755


Mus musculus

Features
Gene ID: ENSMUSG00000026755
  
Biological name :Arpc5l
  
Synonyms : Actin-related protein 2/3 complex subunit 5-like protein / Arpc5l / Q9D898
  
Possible biological names infered from orthology : actin related protein 2/3 complex subunit 5 like / Q9BPX5
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: B
Gene start: 39005348
Gene end: 39015877
  
Corresponding Affymetrix probe sets: 10471904 (MoGene1.0st)   1436421_s_at (Mouse Genome 430 2.0 Array)   1441190_at (Mouse Genome 430 2.0 Array)   1452044_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000088516
Ensembl peptide - ENSMUSP00000108483
NCBI entrez gene - 74192     See in Manteia.
MGI - MGI:1921442
RefSeq - XM_006498391
RefSeq - NM_028809
RefSeq - XM_006498388
RefSeq - XM_006498389
RefSeq Peptide - NP_083085
swissprot - A0A0R3P9C9
swissprot - Q9D898
Ensembl - ENSMUSG00000026755
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 arpc5laENSDARG00000041720Danio rerio
 arpc5lbENSDARG00000035433Danio rerio
 ARPC5LENSGALG00000001014Gallus gallus
 ARPC5LENSG00000136950Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Arpc5 / Q9CPW4 / Actin-related protein 2/3 complex subunit 5 / O15511*ENSMUSG0000000847567


Protein motifs (from Interpro)
Interpro ID Name
 IPR006789  Actin-related protein 2/3 complex subunit 5
 IPR030075  Actin-related protein 2/3 complex subunit 5-like protein
 IPR036743  Actin-related protein 2/3 complex subunit 5 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016477 cell migration IBA
 biological_processGO:0030833 regulation of actin filament polymerization IEA
 biological_processGO:0034314 Arp2/3 complex-mediated actin nucleation IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005885 Arp2/3 protein complex IEA
 cellular_componentGO:0015629 actin cytoskeleton IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0051015 actin filament binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011110 partial preweaning lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
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Allelic Composition: Arf4tm1b(KOMP)Wtsi/Arf4tm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Arf4tm1b(KOMP)Wtsi/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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