ENSDARG00000041869


Danio rerio

Features
Gene ID: ENSDARG00000041869
  
Biological name :tnfrsf19
  
Synonyms : tnfrsf19 / tumor necrosis factor receptor superfamily, member 19
  
Possible biological names infered from orthology : Q9JLL3 / Q9NS68 / TNF receptor superfamily member 19
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 8235531
Gene end: 8309217
  
Corresponding Affymetrix probe sets: Dr.5.1.A1_at (Zebrafish Array)   NM_001044904_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000121724
Ensembl peptide - ENSDARP00000061350
NCBI entrez gene - 559725     See in Manteia.
RefSeq - NM_001044904
RefSeq Peptide - NP_001038369
swissprot - E9QEZ1
swissprot - Q1ECV9
ZFIN ID - ZDB-GENE-030131-6760
Ensembl - ENSDARG00000041869
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TNFRSF19ENSGALG00000017119Gallus gallus
 Q9NS68ENSG00000127863Homo sapiens
 Q9JLL3ENSMUSG00000060548Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001368  TNFR/NGFR cysteine-rich region
 IPR022342  Tumour necrosis factor receptor 19
 IPR034047  Tumor necrosis factor receptor 19, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002040 sprouting angiogenesis IMP
 biological_processGO:0014045 establishment of endothelial blood-brain barrier IMP
 biological_processGO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling IBA
 biological_processGO:0046330 positive regulation of JNK cascade IBA
 biological_processGO:0048916 posterior lateral line development IMP
 biological_processGO:0048922 posterior lateral line neuromast deposition IMP
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000099 brain vasculature brain vasculature increased permeability , abnormal
brain vasculature has fewer parts of type central artery , abnormal
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 ZFA:0000940 posterior lateral line neuromast posterior lateral line neuromast decreased amount , abnormal
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 ZFA:0001157 posterior lateral line primordium posterior lateral line primordium decreased size , abnormal
posterior lateral line primordium disorganized , abnormal
posterior lateral line primordium lacks parts or has fewer parts of type protoneuromast , abnormal
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 ZFA:0001472 anterior lateral line neuromast anterior lateral line neuromast decreased amount , abnormal
Show

 ZFA:0005020 central artery central artery decreased branchiness , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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