ENSDARG00000041991


Danio rerio

Features
Gene ID: ENSDARG00000041991
  
Biological name :rrp9
  
Synonyms : ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast) / rrp9
  
Possible biological names infered from orthology : O43818 / Q91WM3 / ribosomal RNA processing 9, U3 small nucleolar RNA binding protein / U3 small nucleolar RNA-interacting protein 2
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 36215698
Gene end: 36230163
  
Corresponding Affymetrix probe sets: Dr.6359.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000121702
Ensembl peptide - ENSDARP00000147720
NCBI entrez gene - 402808     See in Manteia.
RefSeq - NM_001118895
RefSeq - XM_005172901
RefSeq Peptide - NP_001112367
swissprot - F1R3Q7
ZFIN ID - ZDB-GENE-060427-1
Ensembl - ENSDARG00000041991
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RRP9ENSGALG00000043359Gallus gallus
 RRP9ENSG00000114767Homo sapiens
 Rrp9ENSMUSG00000041506Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tep1 / telomerase-associated protein 1 / P97499* / Q99973* / Telomerase protein component 1 *ENSDARG0000003871311


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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