ENSG00000114767


Homo sapiens

Features
Gene ID: ENSG00000114767
  
Biological name :RRP9
  
Synonyms : O43818 / ribosomal RNA processing 9, U3 small nucleolar RNA binding protein / RRP9
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: p21.2
Gene start: 51933430
Gene end: 51941941
  
Corresponding Affymetrix probe sets: 204133_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000232888
NCBI entrez gene - 9136     See in Manteia.
RefSeq - NM_004704
RefSeq Peptide - NP_004695
swissprot - O43818
Ensembl - ENSG00000114767
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rrp9ENSDARG00000041991Danio rerio
 RRP9ENSGALG00000043359Gallus gallus
 Rrp9ENSMUSG00000041506Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TEP1 / Q99973 / telomerase associated protein 1ENSG0000012956623


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006364 rRNA processing IC
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0031428 box C/D snoRNP complex IDA
 cellular_componentGO:0032040 small-subunit processome IBA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0034511 U3 snoRNA binding IDA


Pathways (from Reactome)
Pathway description
rRNA modification in the nucleus and cytosol
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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