ENSDARG00000042122


Danio rerio

Features
Gene ID: ENSDARG00000042122
  
Biological name :acot11b
  
Synonyms : acot11b / acyl-CoA thioesterase 11b
  
Possible biological names infered from orthology : ACOT11 / acyl-CoA thioesterase 11 / Q8VHQ9 / Q8WXI4
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 17993788
Gene end: 18010735
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000109820
Ensembl peptide - ENSDARP00000119494
Ensembl peptide - ENSDARP00000110267
Ensembl peptide - ENSDARP00000105579
NCBI entrez gene - 641574     See in Manteia.
RefSeq - NM_001037572
RefSeq Peptide - NP_001032661
swissprot - E7FFT3
swissprot - F1QCX7
swissprot - E9QEV1
swissprot - Q2YDR6
ZFIN ID - ZDB-GENE-051127-37
Ensembl - ENSDARG00000042122
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ACOT11ENSGALG00000010785Gallus gallus
 ACOT11ENSG00000162390Homo sapiens
 Acot11ENSMUSG00000034853Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
acot11a / acyl-CoA thioesterase 11a / ACOT11* / Q8VHQ9* / Q8WXI4* / acyl-CoA thioesterase 11*ENSDARG0000005822967
ACOT12 / acyl-CoA thioesterase 12 / Q8WYK0*ENSDARG0000005453450
acot7 / acyl-CoA thioesterase 7 / O00154*ENSDARG0000001865318


Protein motifs (from Interpro)
Interpro ID Name
 IPR002913  START domain
 IPR006683  Thioesterase domain
 IPR023393  START-like domain superfamily
 IPR029069  HotDog domain superfamily
 IPR033120  Hotdog acyl-CoA thioesterase (ACOT)-type domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006631 fatty acid metabolic process IBA
 biological_processGO:0006637 acyl-CoA metabolic process IBA
 cellular_componentGO:0005829 cytosol IBA
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0047617 acyl-CoA hydrolase activity IBA


Pathways (from Reactome)
Pathway description
Mitochondrial Fatty Acid Beta-Oxidation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr