ENSDARG00000042123


Danio rerio

Features
Gene ID: ENSDARG00000042123
  
Biological name :nudt3b
  
Synonyms : nudix (nucleoside diphosphate linked moiety X)-type motif 3b / nudt3b
  
Possible biological names infered from orthology : Diphosphoinositol polyphosphate phosphohydrolase 1 / nudix hydrolase 3 / NUDT3 / O95989 / Q9JI46
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 54154807
Gene end: 54165141
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000061734
NCBI entrez gene - 450013     See in Manteia.
swissprot - Q5XJC2
ZFIN ID - ZDB-GENE-041010-128
Ensembl - ENSDARG00000042123
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NUDT3ENSGALG00000002830Gallus gallus
 NUDT3ENSG00000272325Homo sapiens
 Nudt3ENSMUSG00000024213Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nudt3a / nudix (nucleoside diphosphate linked moiety X)-type motif 3a / NUDT3* / Q9JI46* / O95989* / nudix hydrolase 3* / Diphosphoinositol polyphosphate phosphohydrolase 1 *ENSDARG0000001625680
nudt4a / nudix (nucleoside diphosphate linked moiety X)-type motif 4aENSDARG0000005776768
nudt4b / nudix (nucleoside diphosphate linked moiety X)-type motif 4bENSDARG0000004587863


Protein motifs (from Interpro)
Interpro ID Name
 IPR000086  NUDIX hydrolase domain
 IPR015797  NUDIX hydrolase-like domain superfamily
 IPR020084  NUDIX hydrolase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0071543 diphosphoinositol polyphosphate metabolic process IBA
 biological_processGO:1901907 diadenosine pentaphosphate catabolic process IBA
 biological_processGO:1901909 diadenosine hexaphosphate catabolic process IBA
 biological_processGO:1901911 adenosine 5"-(hexahydrogen pentaphosphate) catabolic process IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000298 endopolyphosphatase activity IBA
 molecular_functionGO:0008486 diphosphoinositol-polyphosphate diphosphatase activity IBA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0034431 bis(5"-adenosyl)-hexaphosphatase activity IBA
 molecular_functionGO:0034432 bis(5"-adenosyl)-pentaphosphatase activity IBA
 molecular_functionGO:0050072 m7G(5")pppN diphosphatase activity IBA


Pathways (from Reactome)
Pathway description
Synthesis of pyrophosphates in the cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr