ENSDARG00000042293


Danio rerio

Features
Gene ID: ENSDARG00000042293
  
Biological name :ca4b
  
Synonyms : ca4b / carbonic anhydrase IV b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 15390882
Gene end: 15401917
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000062023
NCBI entrez gene - 553246     See in Manteia.
RefSeq - NM_001166211
RefSeq Peptide - NP_001159683
swissprot - F1QG32
ZFIN ID - ZDB-GENE-080815-5
Ensembl - ENSDARG00000042293
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ca4a / carbonic anhydrase IV aENSDARG0000004358949
ca4c / carbonic anhydrase IV cENSDARG0000004451237
ca15a / carbonic anhydrase XVa / CA4* / Car4* / P22748* / Q64444* / carbonic anhydrase 4*ENSDARG0000001565431
ca14 / carbonic anhydrase XIV / Car14* / Q9ULX7* / Q9WVT6* / carbonic anhydrase 14* / Mus musculus carbonic anhydrase 14 (Car14), transcript variant 2, mRNA.*ENSDARG0000006169731
ca15c / carbonic anhydrase XV c / CA4* / Car4* / P22748* / Q64444* / carbonic anhydrase 4*ENSDARG0000000225931
ca6 / carbonic anhydrase VI / Car6* / P18761* / P23280* / carbonic anhydrase 6*ENSDARG0000005649930
zgc:153760 / CA4* / Car4* / P22748* / Q64444* / carbonic anhydrase 4*ENSDARG0000007466629
ca15b / carbonic anhydrase XVb / CA4* / Car4* / P22748* / Q64444* / carbonic anhydrase 4*ENSDARG0000004051029
ca9 / carbonic anhydrase IX / Car9* / Q16790* / Q8VHB5* / carbonic anhydrase 9*ENSDARG0000010230029
ca7 / carbonic anhydrase VII / Car7* / P43166* / Q9ERQ8* / carbonic anhydrase 7*ENSDARG0000004513927
CA4 (1 of many) / si:ch211-173d10.4 / CA4* / Car4* / P22748* / Q64444* / carbonic anhydrase 4*ENSDARG0000008775626
ca2 / carbonic anhydrase II / CA3* / CA1* / CA13* / Q8N1Q1* / P00915* / P00918* / P07451* / carbonic anhydrase 1* / carbonic anhydrase 3* / carbonic anhydrase 2* / carbonic anhydrase 13*ENSDARG0000001448826
cahz / Q92051 / carbonic anhydrase / CA2* / CA3* / CA1* / CA13* / Car1* / Car2* / Car3* / Car13* / Q9D6N1* / P00920* / P07451* / P13634* / P16015* / Q8N1Q1* / P00915* / P00918* / carbonic a...ENSDARG0000001116626
ca5a / carbonic anhydrase Va / CA5B* / Car5a* / Car5b* / Q9Y2D0* / P23589* / P35218* / Q9QZA0* / carbonic anhydrase 5A* / carbonic anhydrase 5B* / Carbonic anhydrase 5B, mitochondrial * / C...ENSDARG0000010177825
ca8 / carbonic anhydrase VIII / Car8* / P28651* / P35219* / carbonic anhydrase 8* / Carbonic anhydrase-related protein *ENSDARG0000003909824
ca12 / carbonic anhydrase XII / Car12* / O43570* / carbonic anhydrase 12*ENSDARG0000004564420


Protein motifs (from Interpro)
Interpro ID Name
 IPR001148  Alpha carbonic anhydrase domain
 IPR018338  Carbonic anhydrase, alpha-class, conserved site
 IPR023561  Carbonic anhydrase, alpha-class


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006730 one-carbon metabolic process IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004089 carbonate dehydratase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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