ENSDARG00000042527


Danio rerio

Features
Gene ID: ENSDARG00000042527
  
Biological name :unga
  
Synonyms : unga / uracil DNA glycosylase a
  
Possible biological names infered from orthology : P13051 / P97931 / UNG / uracil DNA glycosylase
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 67351219
Gene end: 67365750
  
Corresponding Affymetrix probe sets: Dr.14822.1.S1_at (Zebrafish Array)   NM_200974_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000062358
Ensembl peptide - ENSDARP00000121704
Ensembl peptide - ENSDARP00000119792
NCBI entrez gene - 393949     See in Manteia.
RefSeq - NM_200974
RefSeq Peptide - NP_957268
swissprot - E9QF01
swissprot - A2BIQ2
swissprot - F1R3I3
ZFIN ID - ZDB-GENE-040426-900
Ensembl - ENSDARG00000042527
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 UNGENSGALG00000021285Gallus gallus
 UNGENSG00000076248Homo sapiens
 UngENSMUSG00000029591Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ungb / uracil DNA glycosylase bENSDARG0000009492256


Protein motifs (from Interpro)
Interpro ID Name
 IPR002043  Uracil-DNA glycosylase family 1
 IPR005122  Uracil-DNA glycosylase-like
 IPR018085  Uracil-DNA glycosylase, active site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006284 base-excision repair IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0044030 regulation of DNA methylation IMP
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IDA
 biological_processGO:0051568 histone H3-K4 methylation IDA
 biological_processGO:0070734 histone H3-K27 methylation IDA
 biological_processGO:0097510 base-excision repair, AP site formation via deaminated base removal IBA
 molecular_functionGO:0004844 uracil DNA N-glycosylase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEA
 molecular_functionGO:0043739 G/U mismatch-specific uracil-DNA glycosylase activity IDA


Pathways (from Reactome)
Pathway description
Cleavage of the damaged pyrimidine
Displacement of DNA glycosylase by APEX1


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000084 yolk yolk deformed , abnormal
Show

 ZFA:0001094 whole organism whole organism deformed , abnormal
whole organism dead , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr