ENSDARG00000042530


Danio rerio

Features
Gene ID: ENSDARG00000042530
  
Biological name :nup205
  
Synonyms : nucleoporin 205 / nup205
  
Possible biological names infered from orthology : Q92621
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 12236044
Gene end: 12270848
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000062215
Ensembl peptide - ENSDARP00000107575
Ensembl peptide - ENSDARP00000062359
Ensembl peptide - ENSDARP00000113552
NCBI entrez gene - 445382     See in Manteia.
RefSeq - NM_001313687
RefSeq - XM_021467634
RefSeq Peptide - NP_001300616
swissprot - F1QJ18
swissprot - F1QHF5
swissprot - Q1L8Z0
swissprot - Q1L8Z1
ZFIN ID - ZDB-GENE-040715-8
Ensembl - ENSDARG00000042530
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000011662Gallus gallus
 NUP205ENSG00000155561Homo sapiens
 Nup205ENSMUSG00000038759Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR021827  Nucleoporin Nup186/Nup192/Nup205


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006913 nucleocytoplasmic transport IEA
 biological_processGO:0006999 nuclear pore organization IBA
 cellular_componentGO:0005643 nuclear pore IEA
 cellular_componentGO:0044611 nuclear pore inner ring IBA
 molecular_functionGO:0017056 structural constituent of nuclear pore IBA


Pathways (from Reactome)
Pathway description
Transport of Mature mRNA derived from an Intron-Containing Transcript
Regulation of Glucokinase by Glucokinase Regulatory Protein
snRNP Assembly
SUMOylation of DNA damage response and repair proteins
SUMOylation of ubiquitinylation proteins
Nuclear Pore Complex (NPC) Disassembly
SUMOylation of SUMOylation proteins
SUMOylation of chromatin organization proteins
SUMOylation of RNA binding proteins
Transcriptional regulation by small RNAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain necrotic , abnormal
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 ZFA:0000012 central nervous system central nervous system necrotic , abnormal
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 ZFA:0000084 yolk yolk circular , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000112 gut gut quality , abnormal
gut hypoplastic , abnormal
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 ZFA:0000123 liver liver quality , abnormal
liver hypoplastic , abnormal
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 ZFA:0001094 whole organism whole organism bent , abnormal
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 ZFA:0001114 head head decreased size , abnormal
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 ZFA:0001115 trunk trunk curved dorsal , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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