ENSDARG00000042563


Danio rerio

Features
Gene ID: ENSDARG00000042563
  
Biological name :mis18bp1
  
Synonyms : MIS18 binding protein 1 / mis18bp1
  
Possible biological names infered from orthology : Q6P0N0 / Q80WQ8
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 28611746
Gene end: 28623360
  
Corresponding Affymetrix probe sets: Dr.5338.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000101196
Ensembl peptide - ENSDARP00000128453
NCBI entrez gene - 368727     See in Manteia.
RefSeq - NM_001312886
RefSeq - XM_005158758
RefSeq Peptide - NP_001299815
swissprot - F1RAN4
ZFIN ID - ZDB-GENE-030616-151
Ensembl - ENSDARG00000042563
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000012452Gallus gallus
 Q6P0N0ENSG00000129534Homo sapiens
 Q80WQ8ENSMUSG00000047534Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001005  SANT/Myb domain
 IPR009057  Homeobox-like domain superfamily
 IPR015216  SANT associated
 IPR017884  SANT domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0000778 condensed nuclear chromosome kinetochore IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
Deposition of new CENPA-containing nucleosomes at the centromere


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000035333 mis18a / MIS18 kinetochore protein A / Q9CZJ6* / Q9NYP9* / Protein Mis18-alpha *  / complex
 ENSDARG00000093597 oip5 / opa interacting protein 5 / A2AQ14* / O43482* / Protein Mis18-beta *  / complex






 

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contact: otassy@igbmc.fr