ENSMUSG00000047534


Mus musculus

Features
Gene ID: ENSMUSG00000047534
  
Biological name :Mis18bp1
  
Synonyms : Mis18-binding protein 1 / Mis18bp1 / Q80WQ8
  
Possible biological names infered from orthology : Q6P0N0
  
Species: Mus musculus
  
Chr. number: 12
Strand: -1
Band: C1
Gene start: 65132734
Gene end: 65172604
  
Corresponding Affymetrix probe sets: 10400589 (MoGene1.0st)   1434767_at (Mouse Genome 430 2.0 Array)   1443667_at (Mouse Genome 430 2.0 Array)   1443668_x_at (Mouse Genome 430 2.0 Array)   1458374_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000152132
Ensembl peptide - ENSMUSP00000152490
Ensembl peptide - ENSMUSP00000152203
Ensembl peptide - ENSMUSP00000052109
NCBI entrez gene - 217653     See in Manteia.
MGI - MGI:2145099
RefSeq - NM_172578
RefSeq Peptide - NP_766166
swissprot - A0A1Y7VN23
swissprot - A0A1Y7VMX3
swissprot - Q80WQ8
Ensembl - ENSMUSG00000047534
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mis18bp1ENSDARG00000042563Danio rerio
 ENSGALG00000012452Gallus gallus
 Q6P0N0ENSG00000129534Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001005  SANT/Myb domain
 IPR009057  Homeobox-like domain superfamily
 IPR015216  SANT associated


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0051301 cell division IEA
 cellular_componentGO:0000775 chromosome, centromeric region IEA
 cellular_componentGO:0000778 condensed nuclear chromosome kinetochore IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Deposition of new CENPA-containing nucleosomes at the centromere


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002111 abnormal tail morphology "abnormal development of the tail resulting in structural abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Mcph1tm1a(EUCOMM)Wtsi/Mcph1tm1a(EUCOMM)Wtsi
Genetic Background: B6JTyr;B6N-Mcph1tm1a(EUCOMM)Wtsi/Wtsi

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000072980 Oip5 / A2AQ14 / Protein Mis18-beta / O43482* / Opa interacting protein 5*  / complex
 ENSMUSG00000027326 Knl1 / Q66JQ7 / Kinetochore scaffold 1 / Q8NG31*  / reaction / complex
 ENSMUSG00000060981 P62806 / Hist1h4h / Histone H4   / complex
 ENSMUSG00000029177 Cenpa / O35216 / Histone H3-like centromeric protein A / P49450* / centromere protein A*  / complex
 ENSMUSG00000022978 Mis18a / Q9CZJ6 / Protein Mis18-alpha / Q9NYP9* / MIS18 kinetochore protein A*  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr