ENSDARG00000042627


Danio rerio

Features
Gene ID: ENSDARG00000042627
  
Biological name :nhsl1b
  
Synonyms : nhsl1b / NHS-like 1b
  
Possible biological names infered from orthology : NHSL1 / NHS like 1 / NHS-like protein 1 / Q5SYE7 / Q8CAF4
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 30725778
Gene end: 30889820
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000062531
Ensembl peptide - ENSDARP00000119066
NCBI entrez gene - 447799     See in Manteia.
swissprot - E7EXR7
swissprot - F1R6W8
ZFIN ID - ZDB-GENE-040910-1
Ensembl - ENSDARG00000042627
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NHSL1ENSGALG00000026981Gallus gallus
 NHSL1ENSG00000135540Homo sapiens
 Nhsl1ENSMUSG00000039835Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nhsl1a / NHS-like 1a / NHSL1* / Q5SYE7* / Q8CAF4* / NHS like 1* / NHS-like protein 1 *ENSDARG0000005453739
nhsb / Nance-Horan syndrome b (congenital cataracts and dental anomalies) / NHS* / Q6T4R5* / NHS actin remodeling regulator*ENSDARG0000007997722
nhsa / Nance-Horan syndrome a (congenital cataracts and dental anomalies) / NHS* / Q6T4R5* / NHS actin remodeling regulator*ENSDARG0000007022718
nhsl2 / NHS-like 2 / Q5HYW2*ENSDARG0000008906614


Protein motifs (from Interpro)
Interpro ID Name
 IPR024845  Nance-Horan syndrome protein family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0097475 motor neuron migration IMP
 cellular_componentGO:0016020 membrane IDA
 molecular_functionGO:0046982 protein heterodimerization activity IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000206 facial nerve motor nucleus facial nerve motor nucleus accumulation rhombomere 4 , abnormal
facial nerve motor nucleus cell migration arrested , abnormal
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 ZFA:0009052 motor neuron motor neuron mislocalised , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr